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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10907177

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr1:1085966 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.165709 (41462/250210, GnomAD_exome)
G=0.158123 (27565/174326, ALFA)
G=0.170072 (20408/119996, ExAC) (+ 18 more)
G=0.07679 (1287/16760, 8.3KJPN)
G=0.18714 (2434/13006, GO-ESP)
G=0.1789 (896/5008, 1000G)
G=0.2013 (902/4480, Estonian)
G=0.1554 (599/3854, ALSPAC)
G=0.1421 (527/3708, TWINSUK)
G=0.0671 (196/2920, KOREAN)
G=0.1749 (331/1892, HapMap)
G=0.0721 (132/1830, Korea1K)
G=0.168 (168/998, GoNL)
G=0.082 (50/612, Vietnamese)
G=0.152 (91/600, NorthernSweden)
G=0.172 (92/534, MGP)
G=0.309 (94/304, FINRISK)
G=0.329 (71/216, Qatari)
A=0.471 (65/138, SGDP_PRJ)
G=0.20 (8/40, GENOME_DK)
A=0.39 (11/28, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
C1orf159 : Missense Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 1 NC_000001.11:g.1085966A>C
GRCh38.p13 chr 1 NC_000001.11:g.1085966A>G
GRCh37.p13 chr 1 NC_000001.10:g.1021346A>C
GRCh37.p13 chr 1 NC_000001.10:g.1021346A>G
Gene: C1orf159, chromosome 1 open reading frame 159 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
C1orf159 transcript variant 3 NM_001363525.2:c.357T>G I [ATT] > M [ATG] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 3 precursor NP_001350454.1:p.Ile119Met I (Ile) > M (Met) Missense Variant
C1orf159 transcript variant 3 NM_001363525.2:c.357T>C I [ATT] > I [ATC] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 3 precursor NP_001350454.1:p.Ile119= I (Ile) > I (Ile) Synonymous Variant
C1orf159 transcript variant 1 NM_001330306.2:c.465T>G I [ATT] > M [ATG] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 1 precursor NP_001317235.1:p.Ile155Met I (Ile) > M (Met) Missense Variant
C1orf159 transcript variant 1 NM_001330306.2:c.465T>C I [ATT] > I [ATC] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 1 precursor NP_001317235.1:p.Ile155= I (Ile) > I (Ile) Synonymous Variant
C1orf159 transcript variant 2 NM_017891.5:c.357T>G I [ATT] > M [ATG] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 2 precursor NP_060361.4:p.Ile119Met I (Ile) > M (Met) Missense Variant
C1orf159 transcript variant 2 NM_017891.5:c.357T>C I [ATT] > I [ATC] Coding Sequence Variant
uncharacterized protein C1orf159 isoform 2 precursor NP_060361.4:p.Ile119= I (Ile) > I (Ile) Synonymous Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 174326 A=0.841877 C=0.000000, G=0.158123
European Sub 148600 A=0.840370 C=0.000000, G=0.159630
African Sub 5984 A=0.8285 C=0.0000, G=0.1715
African Others Sub 190 A=0.842 C=0.000, G=0.158
African American Sub 5794 A=0.8281 C=0.0000, G=0.1719
Asian Sub 662 A=0.912 C=0.000, G=0.088
East Asian Sub 508 A=0.925 C=0.000, G=0.075
Other Asian Sub 154 A=0.870 C=0.000, G=0.130
Latin American 1 Sub 1038 A=0.8372 C=0.0000, G=0.1628
Latin American 2 Sub 6164 A=0.8924 C=0.0000, G=0.1076
South Asian Sub 158 A=0.930 C=0.000, G=0.070
Other Sub 11720 A=0.83643 C=0.00000, G=0.16357


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD - Exomes Global Study-wide 250210 A=0.834291 G=0.165709
gnomAD - Exomes European Sub 134416 A=0.824165 G=0.175835
gnomAD - Exomes Asian Sub 48964 A=0.85487 G=0.14513
gnomAD - Exomes American Sub 34534 A=0.90270 G=0.09730
gnomAD - Exomes African Sub 16154 A=0.74830 G=0.25170
gnomAD - Exomes Ashkenazi Jewish Sub 10038 A=0.78382 G=0.21618
gnomAD - Exomes Other Sub 6104 A=0.8157 G=0.1843
ExAC Global Study-wide 119996 A=0.829928 G=0.170072
ExAC Europe Sub 72320 A=0.82170 G=0.17830
ExAC Asian Sub 25070 A=0.84946 G=0.15054
ExAC American Sub 11472 A=0.91170 G=0.08830
ExAC African Sub 10244 A=0.75185 G=0.24815
ExAC Other Sub 890 A=0.793 G=0.207
8.3KJPN JAPANESE Study-wide 16760 A=0.92321 G=0.07679
GO Exome Sequencing Project Global Study-wide 13006 A=0.81286 G=0.18714
GO Exome Sequencing Project European American Sub 8600 A=0.8416 G=0.1584
GO Exome Sequencing Project African American Sub 4406 A=0.7567 G=0.2433
1000Genomes Global Study-wide 5008 A=0.8211 G=0.1789
1000Genomes African Sub 1322 A=0.7610 G=0.2390
1000Genomes East Asian Sub 1008 A=0.8780 G=0.1220
1000Genomes Europe Sub 1006 A=0.8191 G=0.1809
1000Genomes South Asian Sub 978 A=0.812 G=0.188
1000Genomes American Sub 694 A=0.869 G=0.131
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.7987 G=0.2013
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.8446 G=0.1554
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.8579 G=0.1421
KOREAN population from KRGDB KOREAN Study-wide 2920 A=0.9329 G=0.0671
HapMap Global Study-wide 1892 A=0.8251 G=0.1749
HapMap American Sub 770 A=0.862 G=0.138
HapMap African Sub 692 A=0.769 G=0.231
HapMap Asian Sub 254 A=0.870 G=0.130
HapMap Europe Sub 176 A=0.818 G=0.182
Korean Genome Project KOREAN Study-wide 1830 A=0.9279 G=0.0721
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.832 G=0.168
A Vietnamese Genetic Variation Database Global Study-wide 612 A=0.918 G=0.082
Northern Sweden ACPOP Study-wide 600 A=0.848 G=0.152
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 A=0.828 G=0.172
FINRISK Finnish from FINRISK project Study-wide 304 A=0.691 G=0.309
Qatari Global Study-wide 216 A=0.671 G=0.329
SGDP_PRJ Global Study-wide 138 A=0.471 G=0.529
The Danish reference pan genome Danish Study-wide 40 A=0.80 G=0.20
Siberian Global Study-wide 28 A=0.39 G=0.61
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G
GRCh38.p13 chr 1 NC_000001.11:g.1085966= NC_000001.11:g.1085966A>C NC_000001.11:g.1085966A>G
GRCh37.p13 chr 1 NC_000001.10:g.1021346= NC_000001.10:g.1021346A>C NC_000001.10:g.1021346A>G
C1orf159 transcript variant 2 NM_017891.5:c.357= NM_017891.5:c.357T>G NM_017891.5:c.357T>C
C1orf159 transcript variant 2 NM_017891.4:c.357= NM_017891.4:c.357T>G NM_017891.4:c.357T>C
C1orf159 transcript variant 1 NM_001330306.2:c.465= NM_001330306.2:c.465T>G NM_001330306.2:c.465T>C
C1orf159 transcript variant 1 NM_001330306.1:c.465= NM_001330306.1:c.465T>G NM_001330306.1:c.465T>C
C1orf159 transcript variant 3 NM_001363525.2:c.357= NM_001363525.2:c.357T>G NM_001363525.2:c.357T>C
C1orf159 transcript variant 3 NM_001363525.1:c.357= NM_001363525.1:c.357T>G NM_001363525.1:c.357T>C
C1orf159 transcript variant 2 NM_001114103.1:c.357= NM_001114103.1:c.357T>G NM_001114103.1:c.357T>C
uncharacterized protein C1orf159 isoform 2 precursor NP_060361.4:p.Ile119= NP_060361.4:p.Ile119Met NP_060361.4:p.Ile119=
uncharacterized protein C1orf159 isoform 1 precursor NP_001317235.1:p.Ile155= NP_001317235.1:p.Ile155Met NP_001317235.1:p.Ile155=
uncharacterized protein C1orf159 isoform 3 precursor NP_001350454.1:p.Ile119= NP_001350454.1:p.Ile119Met NP_001350454.1:p.Ile119=
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

104 SubSNP, 25 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss15400806 Feb 27, 2004 (120)
2 SC_SNP ss18142864 Feb 27, 2004 (120)
3 SC_SNP ss18247957 Feb 27, 2004 (120)
4 MGC_GENOME_DIFF ss28504692 Sep 24, 2004 (126)
5 ABI ss43961517 Mar 11, 2006 (126)
6 PERLEGEN ss68756312 May 17, 2007 (127)
7 ILLUMINA ss74998491 Dec 07, 2007 (129)
8 CORNELL ss86240945 Mar 23, 2008 (129)
9 HUMANGENOME_JCVI ss99179686 Feb 04, 2009 (130)
10 BGI ss102713556 Dec 01, 2009 (131)
11 1000GENOMES ss109940842 Jan 24, 2009 (130)
12 KRIBB_YJKIM ss119649760 Dec 01, 2009 (131)
13 ENSEMBL ss131630487 Dec 01, 2009 (131)
14 ILLUMINA ss159937028 Dec 01, 2009 (131)
15 COMPLETE_GENOMICS ss162982929 Jul 04, 2010 (132)
16 COMPLETE_GENOMICS ss163707000 Jul 04, 2010 (132)
17 ILLUMINA ss170736149 Jul 04, 2010 (132)
18 BUSHMAN ss197888386 Jul 04, 2010 (132)
19 1000GENOMES ss230396324 Jul 14, 2010 (132)
20 1000GENOMES ss238115887 Jul 15, 2010 (132)
21 GMI ss275682305 May 04, 2012 (137)
22 PJP ss290494295 May 09, 2011 (134)
23 NHLBI-ESP ss341924351 May 09, 2011 (134)
24 ILLUMINA ss479399787 May 04, 2012 (137)
25 ILLUMINA ss479403010 May 04, 2012 (137)
26 ILLUMINA ss479814164 Sep 08, 2015 (146)
27 ILLUMINA ss484499865 May 04, 2012 (137)
28 1000GENOMES ss489714562 May 04, 2012 (137)
29 CLINSEQ_SNP ss491581853 May 04, 2012 (137)
30 ILLUMINA ss536651703 Sep 08, 2015 (146)
31 TISHKOFF ss553713133 Apr 25, 2013 (138)
32 SSMP ss647518204 Apr 25, 2013 (138)
33 ILLUMINA ss778688296 Sep 08, 2015 (146)
34 ILLUMINA ss782696474 Aug 21, 2014 (142)
35 ILLUMINA ss783664606 Sep 08, 2015 (146)
36 ILLUMINA ss831947524 Apr 01, 2015 (144)
37 ILLUMINA ss834146990 Sep 08, 2015 (146)
38 JMKIDD_LAB ss974432489 Aug 21, 2014 (142)
39 EVA-GONL ss974771708 Aug 21, 2014 (142)
40 JMKIDD_LAB ss1067414426 Aug 21, 2014 (142)
41 JMKIDD_LAB ss1067613481 Aug 21, 2014 (142)
42 1000GENOMES ss1289349098 Aug 21, 2014 (142)
43 DDI ss1425685724 Apr 01, 2015 (144)
44 EVA_GENOME_DK ss1573851890 Apr 01, 2015 (144)
45 EVA_FINRISK ss1584003641 Apr 01, 2015 (144)
46 EVA_DECODE ss1584131616 Apr 01, 2015 (144)
47 EVA_UK10K_ALSPAC ss1599381979 Apr 01, 2015 (144)
48 EVA_UK10K_TWINSUK ss1642376012 Apr 01, 2015 (144)
49 EVA_EXAC ss1685225120 Apr 01, 2015 (144)
50 EVA_MGP ss1710883704 Apr 01, 2015 (144)
51 EVA_SVP ss1712305537 Apr 01, 2015 (144)
52 ILLUMINA ss1751859946 Sep 08, 2015 (146)
53 HAMMER_LAB ss1793716509 Sep 08, 2015 (146)
54 WEILL_CORNELL_DGM ss1917963571 Feb 12, 2016 (147)
55 GENOMED ss1966667714 Jul 19, 2016 (147)
56 JJLAB ss2019499668 Sep 14, 2016 (149)
57 USC_VALOUEV ss2147486341 Dec 20, 2016 (150)
58 HUMAN_LONGEVITY ss2159383677 Dec 20, 2016 (150)
59 TOPMED ss2321523011 Dec 20, 2016 (150)
60 SYSTEMSBIOZJU ss2624265446 Nov 08, 2017 (151)
61 ILLUMINA ss2632465720 Nov 08, 2017 (151)
62 GRF ss2697377282 Nov 08, 2017 (151)
63 GNOMAD ss2730998561 Nov 08, 2017 (151)
64 GNOMAD ss2746173655 Nov 08, 2017 (151)
65 GNOMAD ss2750668378 Nov 08, 2017 (151)
66 SWEGEN ss2986153873 Nov 08, 2017 (151)
67 BIOINF_KMB_FNS_UNIBA ss3023514220 Nov 08, 2017 (151)
68 TOPMED ss3066464584 Nov 08, 2017 (151)
69 TOPMED ss3066464585 Nov 08, 2017 (151)
70 CSHL ss3343274065 Nov 08, 2017 (151)
71 ILLUMINA ss3626007047 Oct 11, 2018 (152)
72 ILLUMINA ss3630505769 Oct 11, 2018 (152)
73 ILLUMINA ss3633571475 Oct 11, 2018 (152)
74 ILLUMINA ss3634302058 Oct 11, 2018 (152)
75 ILLUMINA ss3635265679 Oct 11, 2018 (152)
76 ILLUMINA ss3635978705 Oct 11, 2018 (152)
77 ILLUMINA ss3637016019 Oct 11, 2018 (152)
78 ILLUMINA ss3637732489 Oct 11, 2018 (152)
79 ILLUMINA ss3640009424 Oct 11, 2018 (152)
80 ILLUMINA ss3642746764 Oct 11, 2018 (152)
81 OMUKHERJEE_ADBS ss3646218958 Oct 11, 2018 (152)
82 URBANLAB ss3646581838 Oct 11, 2018 (152)
83 EGCUT_WGS ss3654264976 Jul 12, 2019 (153)
84 EVA_DECODE ss3685997362 Jul 12, 2019 (153)
85 ACPOP ss3726718444 Jul 12, 2019 (153)
86 ILLUMINA ss3744602989 Jul 12, 2019 (153)
87 EVA ss3745723933 Jul 12, 2019 (153)
88 ILLUMINA ss3772104747 Jul 12, 2019 (153)
89 KHV_HUMAN_GENOMES ss3798746565 Jul 12, 2019 (153)
90 EVA ss3823542926 Apr 25, 2020 (154)
91 EVA ss3825549260 Apr 25, 2020 (154)
92 EVA ss3825982479 Apr 25, 2020 (154)
93 SGDP_PRJ ss3848003121 Apr 25, 2020 (154)
94 KRGDB ss3892845679 Apr 25, 2020 (154)
95 KOGIC ss3943635545 Apr 25, 2020 (154)
96 FSA-LAB ss3983910687 Apr 25, 2021 (155)
97 FSA-LAB ss3983910688 Apr 25, 2021 (155)
98 EVA ss3986007851 Apr 25, 2021 (155)
99 EVA ss3986091170 Apr 25, 2021 (155)
100 TOPMED ss4436511210 Apr 25, 2021 (155)
101 TOPMED ss4436511211 Apr 25, 2021 (155)
102 TOMMO_GENOMICS ss5142065444 Apr 25, 2021 (155)
103 EVA ss5236862423 Apr 25, 2021 (155)
104 EVA ss5237158419 Apr 25, 2021 (155)
105 1000Genomes NC_000001.10 - 1021346 Oct 11, 2018 (152)
106 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 1021346 Oct 11, 2018 (152)
107 Genetic variation in the Estonian population NC_000001.10 - 1021346 Oct 11, 2018 (152)
108 ExAC NC_000001.10 - 1021346 Oct 11, 2018 (152)
109 FINRISK NC_000001.10 - 1021346 Apr 25, 2020 (154)
110 The Danish reference pan genome NC_000001.10 - 1021346 Apr 25, 2020 (154)
111 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133613 (NC_000001.11:1085965:A:C 1/140154)
Row 133614 (NC_000001.11:1085965:A:G 26940/140130)

- Apr 25, 2021 (155)
112 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 133613 (NC_000001.11:1085965:A:C 1/140154)
Row 133614 (NC_000001.11:1085965:A:G 26940/140130)

- Apr 25, 2021 (155)
113 gnomAD - Exomes NC_000001.10 - 1021346 Jul 12, 2019 (153)
114 GO Exome Sequencing Project NC_000001.10 - 1021346 Oct 11, 2018 (152)
115 Genome of the Netherlands Release 5 NC_000001.10 - 1021346 Apr 25, 2020 (154)
116 HapMap NC_000001.11 - 1085966 Apr 25, 2020 (154)
117 KOREAN population from KRGDB NC_000001.10 - 1021346 Apr 25, 2020 (154)
118 Korean Genome Project NC_000001.11 - 1085966 Apr 25, 2020 (154)
119 Medical Genome Project healthy controls from Spanish population NC_000001.10 - 1021346 Apr 25, 2020 (154)
120 Northern Sweden NC_000001.10 - 1021346 Jul 12, 2019 (153)
121 Qatari NC_000001.10 - 1021346 Apr 25, 2020 (154)
122 SGDP_PRJ NC_000001.10 - 1021346 Apr 25, 2020 (154)
123 Siberian NC_000001.10 - 1021346 Apr 25, 2020 (154)
124 8.3KJPN NC_000001.10 - 1021346 Apr 25, 2021 (155)
125 TopMed

Submission ignored due to conflicting rows:
Row 117545 (NC_000001.11:1085965:A:C 2/264690)
Row 117546 (NC_000001.11:1085965:A:G 48402/264690)

- Apr 25, 2021 (155)
126 TopMed

Submission ignored due to conflicting rows:
Row 117545 (NC_000001.11:1085965:A:C 2/264690)
Row 117546 (NC_000001.11:1085965:A:G 48402/264690)

- Apr 25, 2021 (155)
127 UK 10K study - Twins NC_000001.10 - 1021346 Oct 11, 2018 (152)
128 A Vietnamese Genetic Variation Database NC_000001.10 - 1021346 Jul 12, 2019 (153)
129 ALFA NC_000001.11 - 1085966 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17850390 Mar 11, 2006 (126)
rs117102130 Aug 16, 2010 (132)
rs386515862 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss2730998561 NC_000001.10:1021345:A:C NC_000001.11:1085965:A:C (self)
65744, 14514097651, ss3066464584, ss4436511210 NC_000001.11:1085965:A:C NC_000001.11:1085965:A:C (self)
ss109940842, ss159937028, ss162982929, ss163707000, ss197888386, ss275682305, ss290494295, ss479399787, ss491581853, ss1584131616, ss1712305537, ss3642746764 NC_000001.9:1011208:A:G NC_000001.11:1085965:A:G (self)
14189, 4324, 3224, 4398707, 102, 1359124, 13358, 1663, 2074, 23073, 456, 3309, 5501, 20101, 2695, 34751, 4324, 989, ss230396324, ss238115887, ss341924351, ss479403010, ss479814164, ss484499865, ss489714562, ss536651703, ss553713133, ss647518204, ss778688296, ss782696474, ss783664606, ss831947524, ss834146990, ss974432489, ss974771708, ss1067414426, ss1067613481, ss1289349098, ss1425685724, ss1573851890, ss1584003641, ss1599381979, ss1642376012, ss1685225120, ss1710883704, ss1751859946, ss1793716509, ss1917963571, ss1966667714, ss2019499668, ss2147486341, ss2321523011, ss2624265446, ss2632465720, ss2697377282, ss2730998561, ss2746173655, ss2750668378, ss2986153873, ss3343274065, ss3626007047, ss3630505769, ss3633571475, ss3634302058, ss3635265679, ss3635978705, ss3637016019, ss3637732489, ss3640009424, ss3646218958, ss3654264976, ss3726718444, ss3744602989, ss3745723933, ss3772104747, ss3823542926, ss3825549260, ss3825982479, ss3848003121, ss3892845679, ss3983910687, ss3983910688, ss3986007851, ss3986091170, ss5142065444 NC_000001.10:1021345:A:G NC_000001.11:1085965:A:G (self)
185, 13546, 65744, 14514097651, ss2159383677, ss3023514220, ss3066464585, ss3646581838, ss3685997362, ss3798746565, ss3943635545, ss4436511211, ss5236862423, ss5237158419 NC_000001.11:1085965:A:G NC_000001.11:1085965:A:G (self)
ss28504692, ss43961517, ss68756312, ss74998491, ss86240945, ss99179686, ss102713556, ss119649760, ss131630487, ss170736149 NT_004350.19:499977:A:G NC_000001.11:1085965:A:G (self)
ss15400806, ss18142864, ss18247957 NT_077913.2:25056:A:G NC_000001.11:1085965:A:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs10907177
PMID Title Author Year Journal
22864933 Identification of novel germline polymorphisms governing capecitabine sensitivity. O'Donnell PH et al. 2012 Cancer
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad