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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs133074

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr22:40682469 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.426472 (112883/264690, TOPMED)
C=0.445346 (62328/139954, GnomAD)
C=0.48810 (44409/90984, ALFA) (+ 21 more)
C=0.38904 (30615/78694, PAGE_STUDY)
T=0.15113 (2533/16760, 8.3KJPN)
C=0.4812 (2410/5008, 1000G)
T=0.4114 (1843/4480, Estonian)
T=0.4930 (1900/3854, ALSPAC)
C=0.4978 (1846/3708, TWINSUK)
T=0.0952 (279/2930, KOREAN)
T=0.4861 (1013/2084, HGDP_Stanford)
C=0.4640 (877/1890, HapMap)
T=0.0972 (178/1832, Korea1K)
T=0.4652 (522/1122, Daghestan)
T=0.461 (460/998, GoNL)
C=0.296 (185/626, Chileans)
T=0.485 (291/600, NorthernSweden)
T=0.466 (249/534, MGP)
T=0.240 (93/388, SGDP_PRJ)
C=0.329 (71/216, Qatari)
T=0.106 (23/216, Vietnamese)
C=0.32 (28/88, Ancient Sardinia)
T=0.27 (12/44, Siberian)
T=0.47 (19/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
MCHR1 : 3 Prime UTR Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 22 NC_000022.11:g.40682469T>A
GRCh38.p13 chr 22 NC_000022.11:g.40682469T>C
GRCh37.p13 chr 22 NC_000022.10:g.41078473T>A
GRCh37.p13 chr 22 NC_000022.10:g.41078473T>C
MCHR1 RefSeqGene NG_029686.1:g.8292T>A
MCHR1 RefSeqGene NG_029686.1:g.8292T>C
Gene: MCHR1, melanin concentrating hormone receptor 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
MCHR1 transcript NM_005297.4:c.*541= N/A 3 Prime UTR Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 90984 T=0.51190 C=0.48810
European Sub 70250 T=0.47085 C=0.52915
African Sub 8430 T=0.7325 C=0.2675
African Others Sub 272 T=0.864 C=0.136
African American Sub 8158 T=0.7281 C=0.2719
Asian Sub 284 T=0.134 C=0.866
East Asian Sub 210 T=0.114 C=0.886
Other Asian Sub 74 T=0.19 C=0.81
Latin American 1 Sub 414 T=0.558 C=0.442
Latin American 2 Sub 3474 T=0.6940 C=0.3060
South Asian Sub 4984 T=0.5644 C=0.4356
Other Sub 3148 T=0.5813 C=0.4187


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.573528 C=0.426472
gnomAD - Genomes Global Study-wide 139954 T=0.554654 C=0.445346
gnomAD - Genomes European Sub 75786 T=0.45904 C=0.54096
gnomAD - Genomes African Sub 41956 T=0.73684 C=0.26316
gnomAD - Genomes American Sub 13614 T=0.64537 C=0.35463
gnomAD - Genomes Ashkenazi Jewish Sub 3322 T=0.5081 C=0.4919
gnomAD - Genomes East Asian Sub 3130 T=0.0869 C=0.9131
gnomAD - Genomes Other Sub 2146 T=0.5480 C=0.4520
Allele Frequency Aggregator Total Global 90984 T=0.51190 C=0.48810
Allele Frequency Aggregator European Sub 70250 T=0.47085 C=0.52915
Allele Frequency Aggregator African Sub 8430 T=0.7325 C=0.2675
Allele Frequency Aggregator South Asian Sub 4984 T=0.5644 C=0.4356
Allele Frequency Aggregator Latin American 2 Sub 3474 T=0.6940 C=0.3060
Allele Frequency Aggregator Other Sub 3148 T=0.5813 C=0.4187
Allele Frequency Aggregator Latin American 1 Sub 414 T=0.558 C=0.442
Allele Frequency Aggregator Asian Sub 284 T=0.134 C=0.866
The PAGE Study Global Study-wide 78694 T=0.61096 C=0.38904
The PAGE Study AfricanAmerican Sub 32512 T=0.72484 C=0.27516
The PAGE Study Mexican Sub 10810 T=0.71036 C=0.28964
The PAGE Study Asian Sub 8316 T=0.1378 C=0.8622
The PAGE Study PuertoRican Sub 7916 T=0.6376 C=0.3624
The PAGE Study NativeHawaiian Sub 4534 T=0.3549 C=0.6451
The PAGE Study Cuban Sub 4230 T=0.5371 C=0.4629
The PAGE Study Dominican Sub 3828 T=0.6418 C=0.3582
The PAGE Study CentralAmerican Sub 2450 T=0.7196 C=0.2804
The PAGE Study SouthAmerican Sub 1982 T=0.6801 C=0.3199
The PAGE Study NativeAmerican Sub 1260 T=0.5968 C=0.4032
The PAGE Study SouthAsian Sub 856 T=0.514 C=0.486
8.3KJPN JAPANESE Study-wide 16760 T=0.15113 C=0.84887
1000Genomes Global Study-wide 5008 T=0.5188 C=0.4812
1000Genomes African Sub 1322 T=0.7579 C=0.2421
1000Genomes East Asian Sub 1008 T=0.1002 C=0.8998
1000Genomes Europe Sub 1006 T=0.4592 C=0.5408
1000Genomes South Asian Sub 978 T=0.550 C=0.450
1000Genomes American Sub 694 T=0.713 C=0.287
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.4114 C=0.5886
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.4930 C=0.5070
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.5022 C=0.4978
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.0952 A=0.0000, C=0.9048
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 T=0.4861 C=0.5139
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 T=0.140 C=0.860
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.505 C=0.495
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.469 C=0.531
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.484 C=0.516
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=0.831 C=0.169
HGDP-CEPH-db Supplement 1 America Sub 216 T=0.963 C=0.037
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.14 C=0.86
HapMap Global Study-wide 1890 T=0.5360 C=0.4640
HapMap American Sub 770 T=0.468 C=0.532
HapMap African Sub 690 T=0.791 C=0.209
HapMap Asian Sub 254 T=0.102 C=0.898
HapMap Europe Sub 176 T=0.460 C=0.540
Korean Genome Project KOREAN Study-wide 1832 T=0.0972 C=0.9028
Genome-wide autozygosity in Daghestan Global Study-wide 1122 T=0.4652 C=0.5348
Genome-wide autozygosity in Daghestan Daghestan Sub 620 T=0.476 C=0.524
Genome-wide autozygosity in Daghestan Near_East Sub 138 T=0.449 C=0.551
Genome-wide autozygosity in Daghestan Central Asia Sub 122 T=0.328 C=0.672
Genome-wide autozygosity in Daghestan Europe Sub 108 T=0.481 C=0.519
Genome-wide autozygosity in Daghestan South Asian Sub 98 T=0.60 C=0.40
Genome-wide autozygosity in Daghestan Caucasus Sub 36 T=0.39 C=0.61
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.461 C=0.539
Chileans Chilean Study-wide 626 T=0.704 C=0.296
Northern Sweden ACPOP Study-wide 600 T=0.485 C=0.515
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 T=0.466 C=0.534
SGDP_PRJ Global Study-wide 388 T=0.240 C=0.760
Qatari Global Study-wide 216 T=0.671 C=0.329
A Vietnamese Genetic Variation Database Global Study-wide 216 T=0.106 C=0.894
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 88 T=0.68 C=0.32
Siberian Global Study-wide 44 T=0.27 C=0.73
The Danish reference pan genome Danish Study-wide 40 T=0.47 C=0.53
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C
GRCh38.p13 chr 22 NC_000022.11:g.40682469= NC_000022.11:g.40682469T>A NC_000022.11:g.40682469T>C
GRCh37.p13 chr 22 NC_000022.10:g.41078473= NC_000022.10:g.41078473T>A NC_000022.10:g.41078473T>C
MCHR1 RefSeqGene NG_029686.1:g.8292= NG_029686.1:g.8292T>A NG_029686.1:g.8292T>C
MCHR1 transcript NM_005297.4:c.*541= NM_005297.4:c.*541T>A NM_005297.4:c.*541T>C
MCHR1 transcript NM_005297.3:c.*541= NM_005297.3:c.*541T>A NM_005297.3:c.*541T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

116 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC ss140885 Jun 24, 2000 (78)
2 CGAP-GAI ss4320892 Jan 04, 2002 (102)
3 SC_SNP ss7998533 Apr 21, 2003 (114)
4 SC_SNP ss13351020 Dec 05, 2003 (119)
5 CSHL-HAPMAP ss16922591 Feb 27, 2004 (120)
6 CSHL-HAPMAP ss20140860 Feb 27, 2004 (120)
7 SSAHASNP ss21841950 Apr 05, 2004 (121)
8 ILLUMINA ss65732909 Oct 13, 2006 (127)
9 AFFY ss66311263 Nov 29, 2006 (127)
10 ILLUMINA ss66606168 Nov 29, 2006 (127)
11 ILLUMINA ss67072299 Nov 29, 2006 (127)
12 ILLUMINA ss67401705 Nov 29, 2006 (127)
13 PERLEGEN ss69272149 May 16, 2007 (127)
14 ILLUMINA ss70422472 May 16, 2007 (127)
15 ILLUMINA ss70601759 May 26, 2008 (130)
16 ILLUMINA ss71146989 May 16, 2007 (127)
17 ILLUMINA ss75468372 Dec 06, 2007 (129)
18 AFFY ss75991545 Dec 06, 2007 (129)
19 KRIBB_YJKIM ss80750547 Dec 15, 2007 (130)
20 HGSV ss83217587 Dec 15, 2007 (130)
21 KRIBB_YJKIM ss83364415 Dec 15, 2007 (130)
22 BGI ss106228305 Feb 06, 2009 (130)
23 1000GENOMES ss112665001 Jan 25, 2009 (130)
24 ILLUMINA ss121637929 Dec 01, 2009 (131)
25 ILLUMINA ss153354527 Dec 01, 2009 (131)
26 GMI ss157206791 Dec 01, 2009 (131)
27 ILLUMINA ss159253217 Dec 01, 2009 (131)
28 COMPLETE_GENOMICS ss167991248 Jul 04, 2010 (132)
29 AFFY ss170113642 Jul 04, 2010 (132)
30 ILLUMINA ss170349329 Jul 04, 2010 (132)
31 COMPLETE_GENOMICS ss172003235 Jul 04, 2010 (132)
32 ILLUMINA ss172386566 Jul 04, 2010 (132)
33 1000GENOMES ss212124473 Jul 14, 2010 (132)
34 1000GENOMES ss228694669 Jul 14, 2010 (132)
35 1000GENOMES ss238079493 Jul 15, 2010 (132)
36 1000GENOMES ss244195314 Jul 15, 2010 (132)
37 BL ss255921848 May 09, 2011 (134)
38 GMI ss283646051 May 04, 2012 (137)
39 GMI ss287573762 Apr 25, 2013 (138)
40 PJP ss292766412 May 09, 2011 (134)
41 ILLUMINA ss479436790 May 04, 2012 (137)
42 ILLUMINA ss484316928 May 04, 2012 (137)
43 GSK-GENETICS ss491266033 May 04, 2012 (137)
44 ILLUMINA ss532986707 Sep 08, 2015 (146)
45 TISHKOFF ss566661281 Apr 25, 2013 (138)
46 SSMP ss662590798 Apr 25, 2013 (138)
47 ILLUMINA ss779586357 Sep 08, 2015 (146)
48 ILLUMINA ss780981083 Sep 08, 2015 (146)
49 ILLUMINA ss825391746 Jul 19, 2016 (147)
50 ILLUMINA ss832765470 Aug 21, 2014 (142)
51 ILLUMINA ss833356300 Aug 21, 2014 (142)
52 ILLUMINA ss835058043 Sep 08, 2015 (146)
53 EVA-GONL ss995384299 Aug 21, 2014 (142)
54 JMKIDD_LAB ss1082681484 Aug 21, 2014 (142)
55 1000GENOMES ss1367297141 Aug 21, 2014 (142)
56 HAMMER_LAB ss1397786066 Sep 08, 2015 (146)
57 DDI ss1429265967 Apr 01, 2015 (144)
58 EVA_GENOME_DK ss1579764289 Apr 01, 2015 (144)
59 EVA_UK10K_ALSPAC ss1640063430 Apr 01, 2015 (144)
60 EVA_UK10K_TWINSUK ss1683057463 Apr 01, 2015 (144)
61 EVA_DECODE ss1699455565 Apr 01, 2015 (144)
62 EVA_MGP ss1711570687 Apr 01, 2015 (144)
63 EVA_SVP ss1713743458 Apr 01, 2015 (144)
64 HAMMER_LAB ss1809802950 Sep 08, 2015 (146)
65 WEILL_CORNELL_DGM ss1938952071 Feb 12, 2016 (147)
66 ILLUMINA ss1959983183 Feb 12, 2016 (147)
67 ILLUMINA ss1959983184 Feb 12, 2016 (147)
68 GENOMED ss1969278136 Jul 19, 2016 (147)
69 JJLAB ss2030248494 Sep 14, 2016 (149)
70 ILLUMINA ss2095123821 Dec 20, 2016 (150)
71 USC_VALOUEV ss2158868139 Dec 20, 2016 (150)
72 HUMAN_LONGEVITY ss2247602318 Dec 20, 2016 (150)
73 TOPMED ss2414584452 Dec 20, 2016 (150)
74 SYSTEMSBIOZJU ss2629620916 Nov 08, 2017 (151)
75 ILLUMINA ss2633882727 Nov 08, 2017 (151)
76 GRF ss2704621006 Nov 08, 2017 (151)
77 GNOMAD ss2974769113 Nov 08, 2017 (151)
78 SWEGEN ss3019358205 Nov 08, 2017 (151)
79 ILLUMINA ss3022190025 Nov 08, 2017 (151)
80 ILLUMINA ss3022190026 Nov 08, 2017 (151)
81 BIOINF_KMB_FNS_UNIBA ss3028960656 Nov 08, 2017 (151)
82 CSHL ss3352851914 Nov 08, 2017 (151)
83 TOPMED ss3378053467 Nov 08, 2017 (151)
84 ILLUMINA ss3628542535 Oct 12, 2018 (152)
85 ILLUMINA ss3631833622 Oct 12, 2018 (152)
86 ILLUMINA ss3638385050 Oct 12, 2018 (152)
87 ILLUMINA ss3639196011 Oct 12, 2018 (152)
88 ILLUMINA ss3639614872 Oct 12, 2018 (152)
89 ILLUMINA ss3642219916 Oct 12, 2018 (152)
90 ILLUMINA ss3643344480 Oct 12, 2018 (152)
91 ILLUMINA ss3652654285 Oct 12, 2018 (152)
92 ILLUMINA ss3652654286 Oct 12, 2018 (152)
93 EGCUT_WGS ss3685851978 Jul 13, 2019 (153)
94 EVA_DECODE ss3708267583 Jul 13, 2019 (153)
95 ILLUMINA ss3725971846 Jul 13, 2019 (153)
96 ACPOP ss3743961510 Jul 13, 2019 (153)
97 EVA ss3759423318 Jul 13, 2019 (153)
98 PAGE_CC ss3772094113 Jul 13, 2019 (153)
99 PACBIO ss3788835619 Jul 13, 2019 (153)
100 PACBIO ss3793699594 Jul 13, 2019 (153)
101 PACBIO ss3798586067 Jul 13, 2019 (153)
102 KHV_HUMAN_GENOMES ss3822583677 Jul 13, 2019 (153)
103 EVA ss3825972114 Apr 27, 2020 (154)
104 EVA ss3836007965 Apr 27, 2020 (154)
105 EVA ss3841632622 Apr 27, 2020 (154)
106 EVA ss3847147806 Apr 27, 2020 (154)
107 HGDP ss3847690392 Apr 27, 2020 (154)
108 SGDP_PRJ ss3890617921 Apr 27, 2020 (154)
109 KRGDB ss3941007518 Apr 27, 2020 (154)
110 KOGIC ss3983711086 Apr 27, 2020 (154)
111 FSA-LAB ss3984236759 Apr 26, 2021 (155)
112 EVA ss3985919912 Apr 26, 2021 (155)
113 EVA ss3986088041 Apr 26, 2021 (155)
114 EVA ss4017882701 Apr 26, 2021 (155)
115 TOPMED ss5110399619 Apr 26, 2021 (155)
116 TOMMO_GENOMICS ss5232785015 Apr 26, 2021 (155)
117 1000Genomes NC_000022.10 - 41078473 Oct 12, 2018 (152)
118 The Avon Longitudinal Study of Parents and Children NC_000022.10 - 41078473 Oct 12, 2018 (152)
119 Chileans NC_000022.10 - 41078473 Apr 27, 2020 (154)
120 Genome-wide autozygosity in Daghestan NC_000022.9 - 39408419 Apr 27, 2020 (154)
121 Genetic variation in the Estonian population NC_000022.10 - 41078473 Oct 12, 2018 (152)
122 The Danish reference pan genome NC_000022.10 - 41078473 Apr 27, 2020 (154)
123 gnomAD - Genomes NC_000022.11 - 40682469 Apr 26, 2021 (155)
124 Genome of the Netherlands Release 5 NC_000022.10 - 41078473 Apr 27, 2020 (154)
125 HGDP-CEPH-db Supplement 1 NC_000022.9 - 39408419 Apr 27, 2020 (154)
126 HapMap NC_000022.11 - 40682469 Apr 27, 2020 (154)
127 KOREAN population from KRGDB NC_000022.10 - 41078473 Apr 27, 2020 (154)
128 Korean Genome Project NC_000022.11 - 40682469 Apr 27, 2020 (154)
129 Medical Genome Project healthy controls from Spanish population NC_000022.10 - 41078473 Apr 27, 2020 (154)
130 Northern Sweden NC_000022.10 - 41078473 Jul 13, 2019 (153)
131 The PAGE Study NC_000022.11 - 40682469 Jul 13, 2019 (153)
132 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000022.10 - 41078473 Apr 26, 2021 (155)
133 Qatari NC_000022.10 - 41078473 Apr 27, 2020 (154)
134 SGDP_PRJ NC_000022.10 - 41078473 Apr 27, 2020 (154)
135 Siberian NC_000022.10 - 41078473 Apr 27, 2020 (154)
136 8.3KJPN NC_000022.10 - 41078473 Apr 26, 2021 (155)
137 TopMed NC_000022.11 - 40682469 Apr 26, 2021 (155)
138 UK 10K study - Twins NC_000022.10 - 41078473 Oct 12, 2018 (152)
139 A Vietnamese Genetic Variation Database NC_000022.10 - 41078473 Jul 13, 2019 (153)
140 ALFA NC_000022.11 - 40682469 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs60687386 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
48184912, ss3941007518 NC_000022.10:41078472:T:A NC_000022.11:40682468:T:A (self)
ss83217587, ss3639196011, ss3639614872 NC_000022.8:39402972:T:C NC_000022.11:40682468:T:C (self)
300019, 368284, ss112665001, ss167991248, ss172003235, ss212124473, ss255921848, ss283646051, ss287573762, ss292766412, ss484316928, ss491266033, ss825391746, ss1397786066, ss1699455565, ss1713743458, ss3643344480, ss3847690392 NC_000022.9:39408418:T:C NC_000022.11:40682468:T:C (self)
80854046, 44724927, 271895, 31590226, 5929228, 19926980, 48184912, 686447, 17246375, 1145839, 20993993, 42634901, 11384493, 90754322, 44724927, 9864799, ss228694669, ss238079493, ss244195314, ss479436790, ss532986707, ss566661281, ss662590798, ss779586357, ss780981083, ss832765470, ss833356300, ss835058043, ss995384299, ss1082681484, ss1367297141, ss1429265967, ss1579764289, ss1640063430, ss1683057463, ss1711570687, ss1809802950, ss1938952071, ss1959983183, ss1959983184, ss1969278136, ss2030248494, ss2095123821, ss2158868139, ss2414584452, ss2629620916, ss2633882727, ss2704621006, ss2974769113, ss3019358205, ss3022190025, ss3022190026, ss3352851914, ss3628542535, ss3631833622, ss3638385050, ss3642219916, ss3652654285, ss3652654286, ss3685851978, ss3743961510, ss3759423318, ss3788835619, ss3793699594, ss3798586067, ss3825972114, ss3836007965, ss3841632622, ss3890617921, ss3941007518, ss3984236759, ss3985919912, ss3986088041, ss4017882701, ss5232785015 NC_000022.10:41078472:T:C NC_000022.11:40682468:T:C (self)
570950324, 2261820, 40089087, 1315582, 240816979, 385508566, 169756138, ss2247602318, ss3028960656, ss3378053467, ss3708267583, ss3725971846, ss3772094113, ss3822583677, ss3847147806, ss3983711086, ss5110399619 NC_000022.11:40682468:T:C NC_000022.11:40682468:T:C (self)
ss13351020, ss16922591, ss20140860, ss21841950 NT_011520.9:20387526:T:C NC_000022.11:40682468:T:C (self)
ss140885, ss4320892, ss7998533, ss65732909, ss66311263, ss66606168, ss67072299, ss67401705, ss69272149, ss70422472, ss70601759, ss71146989, ss75468372, ss75991545, ss80750547, ss83364415, ss106228305, ss121637929, ss153354527, ss157206791, ss159253217, ss170113642, ss170349329, ss172386566 NT_011520.12:20469041:T:C NC_000022.11:40682468:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs133074
PMID Title Author Year Journal
24305679 Melanin-concentrating hormone receptor 1 polymorphisms are associated with components of energy balance in the Complex Diseases in the Newfoundland Population: Environment and Genetics (CODING) study. Fontaine-Bisson B et al. 2014 The American journal of clinical nutrition
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad