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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs17033

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr4:99307788 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.107650 (28494/264690, TOPMED)
C=0.097102 (13609/140152, GnomAD)
C=0.09001 (7589/84312, ALFA) (+ 21 more)
C=0.07154 (1199/16760, 8.3KJPN)
C=0.08223 (847/10300, GO-ESP)
C=0.1090 (546/5008, 1000G)
C=0.0632 (283/4480, Estonian)
C=0.0864 (333/3854, ALSPAC)
C=0.0887 (329/3708, TWINSUK)
C=0.1037 (303/2922, KOREAN)
C=0.1631 (340/2084, HGDP_Stanford)
C=0.0961 (181/1884, HapMap)
C=0.088 (88/998, GoNL)
C=0.104 (82/788, PRJEB37584)
C=0.337 (211/626, Chileans)
C=0.054 (33/614, Vietnamese)
C=0.110 (66/600, NorthernSweden)
C=0.064 (34/534, MGP)
C=0.158 (48/304, FINRISK)
C=0.097 (21/216, Qatari)
T=0.400 (68/170, SGDP_PRJ)
C=0.03 (2/60, Ancient Sardinia)
C=0.12 (5/40, GENOME_DK)
T=0.32 (7/22, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ADH1B : 3 Prime UTR Variant
Publications
11 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 4 NC_000004.12:g.99307788T>C
GRCh37.p13 chr 4 NC_000004.11:g.100228945T>C
ADH1B RefSeqGene NG_011435.1:g.18628A>G
Gene: ADH1B, alcohol dehydrogenase 1B (class I), beta polypeptide (minus strand)
Molecule type Change Amino acid[Codon] SO Term
ADH1B transcript variant 1 NM_000668.6:c.*52= N/A 3 Prime UTR Variant
ADH1B transcript variant 2 NM_001286650.2:c.*52= N/A 3 Prime UTR Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 84312 T=0.90999 C=0.09001
European Sub 68018 T=0.91735 C=0.08265
African Sub 5194 T=0.9332 C=0.0668
African Others Sub 182 T=0.945 C=0.055
African American Sub 5012 T=0.9328 C=0.0672
Asian Sub 234 T=0.944 C=0.056
East Asian Sub 162 T=0.951 C=0.049
Other Asian Sub 72 T=0.93 C=0.07
Latin American 1 Sub 390 T=0.897 C=0.103
Latin American 2 Sub 3386 T=0.7097 C=0.2903
South Asian Sub 4968 T=0.9475 C=0.0525
Other Sub 2122 T=0.8478 C=0.1522


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.892350 C=0.107650
gnomAD - Genomes Global Study-wide 140152 T=0.902898 C=0.097102
gnomAD - Genomes European Sub 75890 T=0.91144 C=0.08856
gnomAD - Genomes African Sub 42028 T=0.93074 C=0.06926
gnomAD - Genomes American Sub 13628 T=0.76387 C=0.23613
gnomAD - Genomes Ashkenazi Jewish Sub 3324 T=0.9143 C=0.0857
gnomAD - Genomes East Asian Sub 3132 T=0.9240 C=0.0760
gnomAD - Genomes Other Sub 2150 T=0.8902 C=0.1098
8.3KJPN JAPANESE Study-wide 16760 T=0.92846 C=0.07154
GO Exome Sequencing Project Global Study-wide 10300 T=0.91777 C=0.08223
GO Exome Sequencing Project European American Sub 7164 T=0.9135 C=0.0865
GO Exome Sequencing Project African American Sub 3136 T=0.9276 C=0.0724
1000Genomes Global Study-wide 5008 T=0.8910 C=0.1090
1000Genomes African Sub 1322 T=0.9274 C=0.0726
1000Genomes East Asian Sub 1008 T=0.9117 C=0.0883
1000Genomes Europe Sub 1006 T=0.9066 C=0.0934
1000Genomes South Asian Sub 978 T=0.962 C=0.038
1000Genomes American Sub 694 T=0.669 C=0.331
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.9368 C=0.0632
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.9136 C=0.0864
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.9113 C=0.0887
KOREAN population from KRGDB KOREAN Study-wide 2922 T=0.8963 C=0.1037
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 T=0.8369 C=0.1631
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 T=0.798 C=0.202
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.874 C=0.126
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.966 C=0.034
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.900 C=0.100
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=0.942 C=0.058
HGDP-CEPH-db Supplement 1 America Sub 216 T=0.495 C=0.505
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.64 C=0.36
HapMap Global Study-wide 1884 T=0.9039 C=0.0961
HapMap American Sub 770 T=0.891 C=0.109
HapMap African Sub 688 T=0.920 C=0.080
HapMap Asian Sub 254 T=0.886 C=0.114
HapMap Europe Sub 172 T=0.924 C=0.076
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.912 C=0.088
CNV burdens in cranial meningiomas Global Study-wide 788 T=0.896 C=0.104
CNV burdens in cranial meningiomas CRM Sub 788 T=0.896 C=0.104
Chileans Chilean Study-wide 626 T=0.663 C=0.337
A Vietnamese Genetic Variation Database Global Study-wide 614 T=0.946 C=0.054
Northern Sweden ACPOP Study-wide 600 T=0.890 C=0.110
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 T=0.936 C=0.064
FINRISK Finnish from FINRISK project Study-wide 304 T=0.842 C=0.158
Qatari Global Study-wide 216 T=0.903 C=0.097
SGDP_PRJ Global Study-wide 170 T=0.400 C=0.600
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 60 T=0.97 C=0.03
The Danish reference pan genome Danish Study-wide 40 T=0.88 C=0.12
Siberian Global Study-wide 22 T=0.32 C=0.68
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= C
GRCh38.p13 chr 4 NC_000004.12:g.99307788= NC_000004.12:g.99307788T>C
GRCh37.p13 chr 4 NC_000004.11:g.100228945= NC_000004.11:g.100228945T>C
ADH1B RefSeqGene NG_011435.1:g.18628= NG_011435.1:g.18628A>G
ADH1B transcript variant 1 NM_000668.6:c.*52= NM_000668.6:c.*52A>G
ADH1B transcript variant 1 NM_000668.5:c.*52= NM_000668.5:c.*52A>G
ADH1B transcript NM_000668.4:c.*52= NM_000668.4:c.*52A>G
ADH1B transcript variant 2 NM_001286650.2:c.*52= NM_001286650.2:c.*52A>G
ADH1B transcript variant 2 NM_001286650.1:c.*52= NM_001286650.1:c.*52A>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

93 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 WIAF ss19442 Sep 19, 2000 (60)
2 LEE ss1508880 Oct 04, 2000 (86)
3 YUSUKE ss4991716 Aug 28, 2002 (108)
4 SNP500CANCER ss5586192 Mar 31, 2003 (113)
5 RIKENSNPRC ss5600843 Dec 12, 2002 (110)
6 KYUGEN ss28461006 Sep 20, 2004 (123)
7 EGP_SNPS ss38318533 May 24, 2005 (125)
8 IMCJ-GDT ss46563498 Mar 13, 2006 (126)
9 AFFY ss66483222 Nov 29, 2006 (127)
10 ILLUMINA ss66771790 Nov 29, 2006 (127)
11 ILLUMINA ss67169132 Nov 29, 2006 (127)
12 ILLUMINA ss67523291 Nov 29, 2006 (127)
13 PERLEGEN ss68906227 May 16, 2007 (127)
14 ILLUMINA ss70449882 May 16, 2007 (127)
15 ILLUMINA ss70650625 May 26, 2008 (130)
16 ILLUMINA ss71207694 May 16, 2007 (127)
17 ILLUMINA ss75780968 Dec 07, 2007 (129)
18 AFFY ss76300951 Dec 07, 2007 (129)
19 CGM_KYOTO ss76859977 Dec 07, 2007 (129)
20 HGSV ss79064734 Dec 07, 2007 (129)
21 KRIBB_YJKIM ss83351745 Dec 15, 2007 (130)
22 ILLUMINA-UK ss117113792 Feb 14, 2009 (130)
23 ILLUMINA ss121782754 Dec 01, 2009 (131)
24 ILLUMINA ss153604587 Dec 01, 2009 (131)
25 ILLUMINA ss159303979 Dec 01, 2009 (131)
26 ILLUMINA ss170738468 Jul 04, 2010 (132)
27 ILLUMINA ss172714612 Jul 04, 2010 (132)
28 AFFY ss173182043 Jul 04, 2010 (132)
29 1000GENOMES ss211458115 Jul 14, 2010 (132)
30 1000GENOMES ss221098934 Jul 14, 2010 (132)
31 1000GENOMES ss232515251 Jul 14, 2010 (132)
32 1000GENOMES ss239780194 Jul 15, 2010 (132)
33 GMI ss277844542 May 04, 2012 (137)
34 CLINSEQ_SNP ss491857750 May 04, 2012 (137)
35 TISHKOFF ss557721413 Apr 25, 2013 (138)
36 SSMP ss651525917 Apr 25, 2013 (138)
37 NHLBI-ESP ss712604764 Apr 25, 2013 (138)
38 ILLUMINA ss825418615 Apr 01, 2015 (144)
39 ILLUMINA ss832816060 Jul 13, 2019 (153)
40 JMKIDD_LAB ss974453455 Aug 21, 2014 (142)
41 EVA-GONL ss980450592 Aug 21, 2014 (142)
42 JMKIDD_LAB ss1067463118 Aug 21, 2014 (142)
43 JMKIDD_LAB ss1071787460 Aug 21, 2014 (142)
44 1000GENOMES ss1310981451 Aug 21, 2014 (142)
45 DDI ss1429982858 Apr 01, 2015 (144)
46 EVA_GENOME_DK ss1580687622 Apr 01, 2015 (144)
47 EVA_FINRISK ss1584035503 Apr 01, 2015 (144)
48 EVA_DECODE ss1589954667 Apr 01, 2015 (144)
49 EVA_UK10K_ALSPAC ss1610737243 Apr 01, 2015 (144)
50 EVA_UK10K_TWINSUK ss1653731276 Apr 01, 2015 (144)
51 EVA_MGP ss1711067190 Apr 01, 2015 (144)
52 EVA_SVP ss1712693134 Apr 01, 2015 (144)
53 HAMMER_LAB ss1801910093 Sep 08, 2015 (146)
54 WEILL_CORNELL_DGM ss1923690636 Feb 12, 2016 (147)
55 ILLUMINA ss1958706879 Feb 12, 2016 (147)
56 GENOMED ss1969816904 Jul 19, 2016 (147)
57 JJLAB ss2022431286 Sep 14, 2016 (149)
58 USC_VALOUEV ss2150560454 Dec 20, 2016 (150)
59 HUMAN_LONGEVITY ss2265428845 Dec 20, 2016 (150)
60 TOPMED ss2433247392 Dec 20, 2016 (150)
61 GRF ss2706037235 Nov 08, 2017 (151)
62 GNOMAD ss2812859445 Nov 08, 2017 (151)
63 AFFY ss2985298865 Nov 08, 2017 (151)
64 AFFY ss2985926753 Nov 08, 2017 (151)
65 SWEGEN ss2995211196 Nov 08, 2017 (151)
66 ILLUMINA ss3022398547 Nov 08, 2017 (151)
67 CSHL ss3345862023 Nov 08, 2017 (151)
68 TOPMED ss3437251377 Nov 08, 2017 (151)
69 ILLUMINA ss3638501756 Oct 12, 2018 (152)
70 ILLUMINA ss3639253271 Oct 12, 2018 (152)
71 ILLUMINA ss3639648036 Oct 12, 2018 (152)
72 ILLUMINA ss3643451932 Oct 12, 2018 (152)
73 BIOINF_KMB_FNS_UNIBA ss3645814322 Oct 12, 2018 (152)
74 OMUKHERJEE_ADBS ss3646310671 Oct 12, 2018 (152)
75 ILLUMINA ss3652884785 Oct 12, 2018 (152)
76 ILLUMINA ss3654070734 Oct 12, 2018 (152)
77 EGCUT_WGS ss3663107120 Jul 13, 2019 (153)
78 EVA_DECODE ss3712657715 Jul 13, 2019 (153)
79 ACPOP ss3731422198 Jul 13, 2019 (153)
80 EVA ss3762167477 Jul 13, 2019 (153)
81 KHV_HUMAN_GENOMES ss3805315916 Jul 13, 2019 (153)
82 EVA ss3824035014 Apr 26, 2020 (154)
83 EVA ss3825661655 Apr 26, 2020 (154)
84 EVA ss3828703781 Apr 26, 2020 (154)
85 HGDP ss3847758964 Apr 26, 2020 (154)
86 SGDP_PRJ ss3859611492 Apr 26, 2020 (154)
87 KRGDB ss3905888942 Apr 26, 2020 (154)
88 FSA-LAB ss3984289948 Apr 26, 2021 (155)
89 EVA ss3984532255 Apr 26, 2021 (155)
90 EVA ss3985085362 Apr 26, 2021 (155)
91 EVA ss4017159569 Apr 26, 2021 (155)
92 TOPMED ss4624655930 Apr 26, 2021 (155)
93 TOMMO_GENOMICS ss5167080187 Apr 26, 2021 (155)
94 1000Genomes NC_000004.11 - 100228945 Oct 12, 2018 (152)
95 The Avon Longitudinal Study of Parents and Children NC_000004.11 - 100228945 Oct 12, 2018 (152)
96 Chileans NC_000004.11 - 100228945 Apr 26, 2020 (154)
97 Genetic variation in the Estonian population NC_000004.11 - 100228945 Oct 12, 2018 (152)
98 FINRISK NC_000004.11 - 100228945 Apr 26, 2020 (154)
99 The Danish reference pan genome NC_000004.11 - 100228945 Apr 26, 2020 (154)
100 gnomAD - Genomes NC_000004.12 - 99307788 Apr 26, 2021 (155)
101 GO Exome Sequencing Project NC_000004.11 - 100228945 Oct 12, 2018 (152)
102 Genome of the Netherlands Release 5 NC_000004.11 - 100228945 Apr 26, 2020 (154)
103 HGDP-CEPH-db Supplement 1 NC_000004.10 - 100447968 Apr 26, 2020 (154)
104 HapMap NC_000004.12 - 99307788 Apr 26, 2020 (154)
105 KOREAN population from KRGDB NC_000004.11 - 100228945 Apr 26, 2020 (154)
106 Medical Genome Project healthy controls from Spanish population NC_000004.11 - 100228945 Apr 26, 2020 (154)
107 Northern Sweden NC_000004.11 - 100228945 Jul 13, 2019 (153)
108 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000004.11 - 100228945 Apr 26, 2021 (155)
109 CNV burdens in cranial meningiomas NC_000004.11 - 100228945 Apr 26, 2021 (155)
110 Qatari NC_000004.11 - 100228945 Apr 26, 2020 (154)
111 SGDP_PRJ NC_000004.11 - 100228945 Apr 26, 2020 (154)
112 Siberian NC_000004.11 - 100228945 Apr 26, 2020 (154)
113 8.3KJPN NC_000004.11 - 100228945 Apr 26, 2021 (155)
114 TopMed NC_000004.12 - 99307788 Apr 26, 2021 (155)
115 UK 10K study - Twins NC_000004.11 - 100228945 Oct 12, 2018 (152)
116 A Vietnamese Genetic Variation Database NC_000004.11 - 100228945 Jul 13, 2019 (153)
117 ALFA NC_000004.12 - 99307788 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs3805326 Oct 08, 2002 (108)
rs60655048 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss79064734, ss3639253271, ss3639648036 NC_000004.9:100586122:T:C NC_000004.12:99307787:T:C (self)
436856, ss117113792, ss211458115, ss277844542, ss491857750, ss825418615, ss1589954667, ss1712693134, ss3643451932, ss3847758964 NC_000004.10:100447967:T:C NC_000004.12:99307787:T:C (self)
22423696, 12473544, 322717, 8845368, 31964, 6852561, 493217, 5514066, 13066336, 182950, 4707063, 311289, 81615, 5732566, 11628472, 3076808, 25049494, 12473544, 2744518, ss221098934, ss232515251, ss239780194, ss557721413, ss651525917, ss712604764, ss832816060, ss974453455, ss980450592, ss1067463118, ss1071787460, ss1310981451, ss1429982858, ss1580687622, ss1584035503, ss1610737243, ss1653731276, ss1711067190, ss1801910093, ss1923690636, ss1958706879, ss1969816904, ss2022431286, ss2150560454, ss2433247392, ss2706037235, ss2812859445, ss2985298865, ss2985926753, ss2995211196, ss3022398547, ss3345862023, ss3638501756, ss3646310671, ss3652884785, ss3654070734, ss3663107120, ss3731422198, ss3762167477, ss3824035014, ss3825661655, ss3828703781, ss3859611492, ss3905888942, ss3984289948, ss3984532255, ss3985085362, ss4017159569, ss5167080187 NC_000004.11:100228944:T:C NC_000004.12:99307787:T:C (self)
158846580, 2670332, 288817046, 462033486, 9042394645, ss2265428845, ss3437251377, ss3645814322, ss3712657715, ss3805315916, ss4624655930 NC_000004.12:99307787:T:C NC_000004.12:99307787:T:C (self)
ss19442, ss1508880, ss4991716, ss5586192, ss5600843, ss28461006, ss38318533, ss46563498, ss66483222, ss66771790, ss67169132, ss67523291, ss68906227, ss70449882, ss70650625, ss71207694, ss75780968, ss76300951, ss76859977, ss83351745, ss121782754, ss153604587, ss159303979, ss170738468, ss172714612, ss173182043 NT_016354.19:24776665:T:C NC_000004.12:99307787:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

11 citations for rs17033
PMID Title Author Year Journal
18331377 Association of ADH and ALDH genes with alcohol dependence in the Irish Affected Sib Pair Study of alcohol dependence (IASPSAD) sample. Kuo PH et al. 2008 Alcoholism, clinical and experimental research
18936436 Prevalence in the United States of selected candidate gene variants: Third National Health and Nutrition Examination Survey, 1991-1994. Chang MH et al. 2009 American journal of epidemiology
18996923 Associations of ADH and ALDH2 gene variation with self report alcohol reactions, consumption and dependence: an integrated analysis. Macgregor S et al. 2009 Human molecular genetics
19193628 ADH single nucleotide polymorphism associations with alcohol metabolism in vivo. Birley AJ et al. 2009 Human molecular genetics
19298322 Associations and interactions between SNPs in the alcohol metabolizing genes and alcoholism phenotypes in European Americans. Sherva R et al. 2009 Alcoholism, clinical and experimental research
20089146 The ADH1B Arg47His polymorphism in east Asian populations and expansion of rice domestication in history. Peng Y et al. 2010 BMC evolutionary biology
21083667 Haplotype-based study of the association of alcohol-metabolizing genes with alcohol dependence in four independent populations. Liu J et al. 2011 Alcoholism, clinical and experimental research
21592108 Diversification of the ADH1B gene during expansion of modern humans. Li H et al. 2011 Annals of human genetics
24633362 ALDH2 and ADH1 genetic polymorphisms may contribute to the risk of gastric cancer: a meta-analysis. Wang HL et al. 2014 PloS one
26959740 A single-nucleotide polymorphism in the 3'-UTR region of the adipocyte fatty acid binding protein 4 gene is associated with prognosis of triple-negative breast cancer. Wang W et al. 2016 Oncotarget
29166882 Polymorphisms in ADH1B and ALDH2 genes associated with the increased risk of gastric cancer in West Bengal, India. Ghosh S et al. 2017 BMC cancer
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad