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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2233967

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr6:31113051 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.134096 (35494/264690, TOPMED)
G=0.14819 (12604/85052, ALFA)
G=0.14344 (11284/78666, PAGE_STUDY) (+ 14 more)
G=0.33640 (5638/16760, 8.3KJPN)
G=0.1801 (902/5008, 1000G)
G=0.1344 (602/4480, Estonian)
G=0.1788 (689/3854, ALSPAC)
G=0.1599 (593/3708, TWINSUK)
G=0.2358 (689/2922, KOREAN)
G=0.126 (126/998, GoNL)
G=0.297 (235/790, PRJEB37584)
G=0.200 (120/600, NorthernSweden)
C=0.422 (92/218, SGDP_PRJ)
G=0.231 (50/216, Qatari)
G=0.222 (48/216, Vietnamese)
G=0.10 (4/40, GENOME_DK)
C=0.43 (6/14, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
C6orf15 : 2KB Upstream Variant
PSORS1C1 : 2KB Upstream Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 6 NC_000006.12:g.31113051C>G
GRCh38.p13 chr 6 NC_000006.12:g.31113051C>T
GRCh37.p13 chr 6 NC_000006.11:g.31080828C>G
GRCh37.p13 chr 6 NC_000006.11:g.31080828C>T
PSORS1C1 RefSeqGene NG_021348.1:g.3221C>G
PSORS1C1 RefSeqGene NG_021348.1:g.3221C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2595426C>G
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2595426C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2595532C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2595532C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2457168C>G
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2457168C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2462753C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2462753C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2423554C>G
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2423554C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2429174C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2429174C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2371050C>G
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2371050C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2376646C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2376646C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2372415C>G
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2372415C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2378000C>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2378000C>T
Gene: PSORS1C1, psoriasis susceptibility 1 candidate 1 (plus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
PSORS1C1 transcript NM_014068.3:c. N/A Upstream Transcript Variant
Gene: C6orf15, chromosome 6 open reading frame 15 (minus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
C6orf15 transcript NM_014070.3:c. N/A Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency (New)
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 85052 C=0.85181 G=0.14819, T=0.00000
European Sub 75282 C=0.84915 G=0.15085, T=0.00000
African Sub 3482 C=0.9721 G=0.0279, T=0.0000
African Others Sub 160 C=0.994 G=0.006, T=0.000
African American Sub 3322 C=0.9711 G=0.0289, T=0.0000
Asian Sub 3226 C=0.7604 G=0.2396, T=0.0000
East Asian Sub 2608 C=0.7550 G=0.2450, T=0.0000
Other Asian Sub 618 C=0.783 G=0.217, T=0.000
Latin American 1 Sub 412 C=0.854 G=0.146, T=0.000
Latin American 2 Sub 776 C=0.938 G=0.062, T=0.000
South Asian Sub 244 C=0.840 G=0.160, T=0.000
Other Sub 1630 C=0.8583 G=0.1417, T=0.0000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.865904 G=0.134096
The PAGE Study Global Study-wide 78666 C=0.85656 G=0.14344
The PAGE Study AfricanAmerican Sub 32510 C=0.92827 G=0.07173
The PAGE Study Mexican Sub 10806 C=0.82982 G=0.17018
The PAGE Study Asian Sub 8304 C=0.6887 G=0.3113
The PAGE Study PuertoRican Sub 7914 C=0.8796 G=0.1204
The PAGE Study NativeHawaiian Sub 4534 C=0.7000 G=0.3000
The PAGE Study Cuban Sub 4228 C=0.8579 G=0.1421
The PAGE Study Dominican Sub 3824 C=0.8758 G=0.1242
The PAGE Study CentralAmerican Sub 2450 C=0.8351 G=0.1649
The PAGE Study SouthAmerican Sub 1980 C=0.8121 G=0.1879
The PAGE Study NativeAmerican Sub 1260 C=0.8389 G=0.1611
The PAGE Study SouthAsian Sub 856 C=0.813 G=0.187
8.3KJPN JAPANESE Study-wide 16760 C=0.66360 G=0.33640
1000Genomes Global Study-wide 5008 C=0.8199 G=0.1801
1000Genomes African Sub 1322 C=0.9508 G=0.0492
1000Genomes East Asian Sub 1008 C=0.6825 G=0.3175
1000Genomes Europe Sub 1006 C=0.8429 G=0.1571
1000Genomes South Asian Sub 978 C=0.766 G=0.234
1000Genomes American Sub 694 C=0.813 G=0.187
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8656 G=0.1344
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8212 G=0.1788
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8401 G=0.1599
KOREAN population from KRGDB KOREAN Study-wide 2922 C=0.7642 G=0.2358
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.874 G=0.126
CNV burdens in cranial meningiomas Global Study-wide 790 C=0.703 G=0.297
CNV burdens in cranial meningiomas CRM Sub 790 C=0.703 G=0.297
Northern Sweden ACPOP Study-wide 600 C=0.800 G=0.200
SGDP_PRJ Global Study-wide 218 C=0.422 G=0.578
Qatari Global Study-wide 216 C=0.769 G=0.231
A Vietnamese Genetic Variation Database Global Study-wide 216 C=0.778 G=0.222
The Danish reference pan genome Danish Study-wide 40 C=0.90 G=0.10
Siberian Global Study-wide 14 C=0.43 G=0.57
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= G T
GRCh38.p13 chr 6 NC_000006.12:g.31113051= NC_000006.12:g.31113051C>G NC_000006.12:g.31113051C>T
GRCh37.p13 chr 6 NC_000006.11:g.31080828= NC_000006.11:g.31080828C>G NC_000006.11:g.31080828C>T
PSORS1C1 RefSeqGene NG_021348.1:g.3221= NG_021348.1:g.3221C>G NG_021348.1:g.3221C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2595426= NT_113891.3:g.2595426C>G NT_113891.3:g.2595426C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2595532= NT_113891.2:g.2595532C>G NT_113891.2:g.2595532C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2457168= NT_167247.2:g.2457168C>G NT_167247.2:g.2457168C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2462753= NT_167247.1:g.2462753C>G NT_167247.1:g.2462753C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2423554= NT_167246.2:g.2423554C>G NT_167246.2:g.2423554C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2429174= NT_167246.1:g.2429174C>G NT_167246.1:g.2429174C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2371050= NT_167248.2:g.2371050C>G NT_167248.2:g.2371050C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2376646= NT_167248.1:g.2376646C>G NT_167248.1:g.2376646C>T
GRCh38.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2372415= NT_167245.2:g.2372415C>G NT_167245.2:g.2372415C>T
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2378000= NT_167245.1:g.2378000C>G NT_167245.1:g.2378000C>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

98 SubSNP, 19 Frequency submissions
No Submitter Submission ID Date (Build)
1 GENAISSANCE ss3181464 Aug 15, 2001 (98)
2 SC_SNP ss12859772 Dec 05, 2003 (119)
3 ABI ss44760642 Mar 14, 2006 (126)
4 AFFY ss66072196 Dec 01, 2006 (127)
5 ILLUMINA ss75291414 Dec 07, 2007 (129)
6 AFFY ss76003410 Dec 07, 2007 (129)
7 KRIBB_YJKIM ss81731499 Dec 14, 2007 (130)
8 ILLUMINA ss123146676 Dec 01, 2009 (131)
9 ILLUMINA ss153888885 Dec 01, 2009 (131)
10 GMI ss156723963 Dec 01, 2009 (131)
11 ILLUMINA ss160518324 Dec 01, 2009 (131)
12 COMPLETE_GENOMICS ss166406125 Jul 04, 2010 (132)
13 AFFY ss170273186 Jul 04, 2010 (132)
14 ILLUMINA ss171106342 Jul 04, 2010 (132)
15 ILLUMINA ss173197742 Jul 04, 2010 (132)
16 BCM-HGSC-SUB ss207862643 Jul 04, 2010 (132)
17 1000GENOMES ss222296680 Jul 14, 2010 (132)
18 1000GENOMES ss233391373 Jul 14, 2010 (132)
19 1000GENOMES ss240463009 Jul 15, 2010 (132)
20 GMI ss278719492 May 04, 2012 (137)
21 ILLUMINA ss480474451 May 04, 2012 (137)
22 ILLUMINA ss480488795 May 04, 2012 (137)
23 ILLUMINA ss481287635 Sep 08, 2015 (146)
24 ILLUMINA ss485034708 May 04, 2012 (137)
25 ILLUMINA ss537058350 Sep 08, 2015 (146)
26 TISHKOFF ss559107812 Apr 25, 2013 (138)
27 SSMP ss653026297 Apr 25, 2013 (138)
28 ILLUMINA ss778342334 Aug 21, 2014 (142)
29 ILLUMINA ss782963598 Aug 21, 2014 (142)
30 ILLUMINA ss783925555 Aug 21, 2014 (142)
31 ILLUMINA ss825649163 Apr 01, 2015 (144)
32 ILLUMINA ss832219841 Apr 01, 2015 (144)
33 ILLUMINA ss833796945 Aug 21, 2014 (142)
34 EVA-GONL ss982755071 Aug 21, 2014 (142)
35 JMKIDD_LAB ss1073499560 Aug 21, 2014 (142)
36 1000GENOMES ss1319539183 Aug 21, 2014 (142)
37 EVA_GENOME_DK ss1581600705 Apr 01, 2015 (144)
38 EVA_DECODE ss1592301943 Apr 01, 2015 (144)
39 EVA_UK10K_ALSPAC ss1615267487 Apr 01, 2015 (144)
40 EVA_UK10K_TWINSUK ss1658261520 Apr 01, 2015 (144)
41 EVA_SVP ss1712849982 Apr 01, 2015 (144)
42 ILLUMINA ss1752627397 Sep 08, 2015 (146)
43 WEILL_CORNELL_DGM ss1926006381 Feb 12, 2016 (147)
44 ILLUMINA ss1946172776 Feb 12, 2016 (147)
45 ILLUMINA ss1958884750 Feb 12, 2016 (147)
46 JJLAB ss2023633200 Sep 14, 2016 (149)
47 ILLUMINA ss2094823700 Dec 20, 2016 (150)
48 ILLUMINA ss2095176978 Dec 20, 2016 (150)
49 USC_VALOUEV ss2151798726 Nov 08, 2017 (151)
50 HUMAN_LONGEVITY ss2282923062 Dec 20, 2016 (150)
51 TOPMED ss2451294566 Dec 20, 2016 (150)
52 SYSTEMSBIOZJU ss2626302903 Nov 08, 2017 (151)
53 ILLUMINA ss2634427422 Nov 08, 2017 (151)
54 GRF ss2707391520 Nov 08, 2017 (151)
55 ILLUMINA ss2711068050 Nov 08, 2017 (151)
56 GNOMAD ss2837386188 Nov 08, 2017 (151)
57 AFFY ss2985992365 Nov 08, 2017 (151)
58 SWEGEN ss2998780910 Nov 08, 2017 (151)
59 ILLUMINA ss3022596221 Nov 08, 2017 (151)
60 BIOINF_KMB_FNS_UNIBA ss3025602040 Nov 08, 2017 (151)
61 TOPMED ss3493760270 Nov 08, 2017 (151)
62 ILLUMINA ss3625897637 Oct 12, 2018 (152)
63 ILLUMINA ss3629498604 Oct 12, 2018 (152)
64 ILLUMINA ss3632346257 Oct 12, 2018 (152)
65 ILLUMINA ss3633414569 Oct 12, 2018 (152)
66 ILLUMINA ss3634136987 Oct 12, 2018 (152)
67 ILLUMINA ss3635055751 Oct 12, 2018 (152)
68 ILLUMINA ss3635818061 Oct 12, 2018 (152)
69 ILLUMINA ss3636776026 Oct 12, 2018 (152)
70 ILLUMINA ss3637570827 Oct 12, 2018 (152)
71 ILLUMINA ss3638618758 Oct 12, 2018 (152)
72 ILLUMINA ss3640763049 Oct 12, 2018 (152)
73 ILLUMINA ss3643560181 Oct 12, 2018 (152)
74 ILLUMINA ss3644905850 Oct 12, 2018 (152)
75 ILLUMINA ss3653108383 Oct 12, 2018 (152)
76 EGCUT_WGS ss3666702851 Jul 13, 2019 (153)
77 EVA_DECODE ss3716893310 Jul 13, 2019 (153)
78 ILLUMINA ss3726328198 Jul 13, 2019 (153)
79 ACPOP ss3733349899 Jul 13, 2019 (153)
80 ILLUMINA ss3744269047 Jul 13, 2019 (153)
81 ILLUMINA ss3745355787 Jul 13, 2019 (153)
82 EVA ss3764810830 Jul 13, 2019 (153)
83 PAGE_CC ss3771277436 Jul 13, 2019 (153)
84 ILLUMINA ss3772849492 Jul 13, 2019 (153)
85 KHV_HUMAN_GENOMES ss3807965083 Jul 13, 2019 (153)
86 EVA ss3829823536 Apr 26, 2020 (154)
87 EVA ss3838389183 Apr 26, 2020 (154)
88 EVA ss3843830584 Apr 26, 2020 (154)
89 SGDP_PRJ ss3864237173 Apr 26, 2020 (154)
90 KRGDB ss3911012867 Apr 26, 2020 (154)
91 EVA ss3984565128 Apr 26, 2021 (155)
92 EVA ss4017265505 Apr 26, 2021 (155)
93 VINODS ss4025183494 Apr 26, 2021 (155)
94 VINODS ss4025225283 Apr 26, 2021 (155)
95 VINODS ss4025244457 Apr 26, 2021 (155)
96 VINODS ss4025262512 Apr 26, 2021 (155)
97 TOPMED ss4698304028 Apr 26, 2021 (155)
98 TOMMO_GENOMICS ss5176813463 Apr 26, 2021 (155)
99 1000Genomes NC_000006.11 - 31080828 Oct 12, 2018 (152)
100 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 31080828 Oct 12, 2018 (152)
101 Genetic variation in the Estonian population NC_000006.11 - 31080828 Oct 12, 2018 (152)
102 The Danish reference pan genome NC_000006.11 - 31080828 Apr 26, 2020 (154)
103 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 221129802 (NC_000006.12:31113050:C:G 18671/140154)
Row 221129803 (NC_000006.12:31113050:C:T 0/140186)

- Apr 26, 2021 (155)
104 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 221129802 (NC_000006.12:31113050:C:G 18671/140154)
Row 221129803 (NC_000006.12:31113050:C:T 0/140186)

- Apr 26, 2021 (155)
105 Genome of the Netherlands Release 5 NC_000006.11 - 31080828 Apr 26, 2020 (154)
106 KOREAN population from KRGDB NC_000006.11 - 31080828 Apr 26, 2020 (154)
107 Northern Sweden NC_000006.11 - 31080828 Jul 13, 2019 (153)
108 The PAGE Study NC_000006.12 - 31113051 Jul 13, 2019 (153)
109 CNV burdens in cranial meningiomas NC_000006.11 - 31080828 Apr 26, 2021 (155)
110 Qatari NC_000006.11 - 31080828 Apr 26, 2020 (154)
111 SGDP_PRJ NC_000006.11 - 31080828 Apr 26, 2020 (154)
112 Siberian NC_000006.11 - 31080828 Apr 26, 2020 (154)
113 8.3KJPN NC_000006.11 - 31080828 Apr 26, 2021 (155)
114 TopMed NC_000006.12 - 31113051 Apr 26, 2021 (155)
115 UK 10K study - Twins NC_000006.11 - 31080828 Oct 12, 2018 (152)
116 A Vietnamese Genetic Variation Database NC_000006.11 - 31080828 Jul 13, 2019 (153)
117 ALFA NC_000006.12 - 31113051 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs56683693 Feb 27, 2009 (130)
rs115354805 Oct 26, 2010 (133)
rs117042344 Aug 16, 2010 (132)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss66072196, ss76003410, ss160518324, ss166406125, ss170273186, ss207862643, ss278719492, ss480474451, ss825649163, ss1592301943, ss1712849982, ss3643560181 NC_000006.10:31188806:C:G NC_000006.12:31113050:C:G (self)
31305790, 17455785, 12441099, 7765644, 7754626, 18190261, 6634764, 114518, 8048311, 16254153, 4315080, 34782770, 17455785, 3868310, ss222296680, ss233391373, ss240463009, ss480488795, ss481287635, ss485034708, ss537058350, ss559107812, ss653026297, ss778342334, ss782963598, ss783925555, ss832219841, ss833796945, ss982755071, ss1073499560, ss1319539183, ss1581600705, ss1615267487, ss1658261520, ss1752627397, ss1926006381, ss1946172776, ss1958884750, ss2023633200, ss2094823700, ss2095176978, ss2151798726, ss2451294566, ss2626302903, ss2634427422, ss2707391520, ss2711068050, ss2837386188, ss2985992365, ss2998780910, ss3022596221, ss3625897637, ss3629498604, ss3632346257, ss3633414569, ss3634136987, ss3635055751, ss3635818061, ss3636776026, ss3637570827, ss3638618758, ss3640763049, ss3644905850, ss3653108383, ss3666702851, ss3733349899, ss3744269047, ss3745355787, ss3764810830, ss3772849492, ss3829823536, ss3838389183, ss3864237173, ss3911012867, ss3984565128, ss4017265505, ss5176813463 NC_000006.11:31080827:C:G NC_000006.12:31113050:C:G (self)
498905, 334989102, 535681586, 4862466640, ss2282923062, ss3025602040, ss3493760270, ss3716893310, ss3726328198, ss3771277436, ss3807965083, ss3843830584, ss4698304028 NC_000006.12:31113050:C:G NC_000006.12:31113050:C:G (self)
ss3181464, ss44760642, ss75291414, ss81731499, ss123146676, ss153888885, ss156723963, ss171106342, ss173197742 NT_007592.15:31020827:C:G NC_000006.12:31113050:C:G (self)
ss12859772 NT_033951.3:2532038:C:G NC_000006.12:31113050:C:G (self)
ss4025183494 NT_113891.3:2595425:C:G NC_000006.12:31113050:C:G
ss4025225283 NT_167246.2:2423553:C:G NC_000006.12:31113050:C:G
ss4025244457 NT_167247.2:2457167:C:G NC_000006.12:31113050:C:G
ss4025262512 NT_167248.2:2371049:C:G NC_000006.12:31113050:C:G
4862466640 NC_000006.12:31113050:C:T NC_000006.12:31113050:C:T
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs2233967
PMID Title Author Year Journal
20976797 P-value based analysis for shared controls design in genome-wide association studies. Zaykin DV et al. 2010 Genetic epidemiology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad