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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs34221914

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr1:6462148 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A / G>C / G>T
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.009498 (2514/264690, TOPMED)
A=0.002919 (475/162730, ALFA)
A=0.008850 (1241/140222, GnomAD) (+ 10 more)
A=0.00861 (112/13006, GO-ESP)
A=0.0054 (27/5008, 1000G)
A=0.0009 (4/4480, Estonian)
A=0.0010 (4/3854, ALSPAC)
A=0.0011 (4/3708, TWINSUK)
A=0.0105 (17/1620, HapMap)
A=0.001 (1/998, GoNL)
A=0.009 (2/216, Qatari)
G=0.5 (1/2, SGDP_PRJ)
A=0.5 (1/2, SGDP_PRJ)
Clinical Significance
Reported in ClinVar
Gene : Consequence
TNFRSF25 : Missense Variant
Publications
0 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 1 NC_000001.11:g.6462148G>A
GRCh38.p13 chr 1 NC_000001.11:g.6462148G>C
GRCh38.p13 chr 1 NC_000001.11:g.6462148G>T
GRCh37.p13 chr 1 NC_000001.10:g.6522208G>A
GRCh37.p13 chr 1 NC_000001.10:g.6522208G>C
GRCh37.p13 chr 1 NC_000001.10:g.6522208G>T
ESPN RefSeqGene (LRG_1281) NG_015866.1:g.42361G>A
ESPN RefSeqGene (LRG_1281) NG_015866.1:g.42361G>C
ESPN RefSeqGene (LRG_1281) NG_015866.1:g.42361G>T
TNFRSF25 RefSeqGene NG_029910.1:g.9048C>T
TNFRSF25 RefSeqGene NG_029910.1:g.9048C>G
TNFRSF25 RefSeqGene NG_029910.1:g.9048C>A
Gene: TNFRSF25, TNF receptor superfamily member 25 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
TNFRSF25 transcript variant 12 NM_001039664.2:c. N/A Genic Downstream Transcript Variant
TNFRSF25 transcript variant 2 NM_003790.3:c.771C>T S [AGC] > S [AGT] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 2 precursor NP_003781.1:p.Ser257= S (Ser) > S (Ser) Synonymous Variant
TNFRSF25 transcript variant 2 NM_003790.3:c.771C>G S [AGC] > R [AGG] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 2 precursor NP_003781.1:p.Ser257Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 2 NM_003790.3:c.771C>A S [AGC] > R [AGA] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 2 precursor NP_003781.1:p.Ser257Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 7 NM_148970.2:c.222C>T S [AGC] > S [AGT] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 7 precursor NP_683871.1:p.Ser74= S (Ser) > S (Ser) Synonymous Variant
TNFRSF25 transcript variant 7 NM_148970.2:c.222C>G S [AGC] > R [AGG] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 7 precursor NP_683871.1:p.Ser74Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 7 NM_148970.2:c.222C>A S [AGC] > R [AGA] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 7 precursor NP_683871.1:p.Ser74Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 1 NM_148965.2:c.798C>T S [AGC] > S [AGT] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 1 precursor NP_683866.1:p.Ser266= S (Ser) > S (Ser) Synonymous Variant
TNFRSF25 transcript variant 1 NM_148965.2:c.798C>G S [AGC] > R [AGG] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 1 precursor NP_683866.1:p.Ser266Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 1 NM_148965.2:c.798C>A S [AGC] > R [AGA] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 1 precursor NP_683866.1:p.Ser266Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 4 NM_148967.2:c.636C>T S [AGC] > S [AGT] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 4 precursor NP_683868.1:p.Ser212= S (Ser) > S (Ser) Synonymous Variant
TNFRSF25 transcript variant 4 NM_148967.2:c.636C>G S [AGC] > R [AGG] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 4 precursor NP_683868.1:p.Ser212Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 4 NM_148967.2:c.636C>A S [AGC] > R [AGA] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 4 precursor NP_683868.1:p.Ser212Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 3 NM_148966.2:c.660C>T S [AGC] > S [AGT] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 3 precursor NP_683867.1:p.Ser220= S (Ser) > S (Ser) Synonymous Variant
TNFRSF25 transcript variant 3 NM_148966.2:c.660C>G S [AGC] > R [AGG] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 3 precursor NP_683867.1:p.Ser220Arg S (Ser) > R (Arg) Missense Variant
TNFRSF25 transcript variant 3 NM_148966.2:c.660C>A S [AGC] > R [AGA] Coding Sequence Variant
tumor necrosis factor receptor superfamily member 25 isoform 3 precursor NP_683867.1:p.Ser220Arg S (Ser) > R (Arg) Missense Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: A (allele ID: 719053 )
ClinVar Accession Disease Names Clinical Significance
RCV000892331.1 not provided Benign

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 162730 G=0.997081 A=0.002919
European Sub 139684 G=0.998389 A=0.001611
African Sub 7276 G=0.9720 A=0.0280
African Others Sub 246 G=0.959 A=0.041
African American Sub 7030 G=0.9724 A=0.0276
Asian Sub 676 G=1.000 A=0.000
East Asian Sub 514 G=1.000 A=0.000
Other Asian Sub 162 G=1.000 A=0.000
Latin American 1 Sub 1020 G=0.9971 A=0.0029
Latin American 2 Sub 2226 G=0.9978 A=0.0022
South Asian Sub 184 G=1.000 A=0.000
Other Sub 11664 G=0.99674 A=0.00326


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.990502 A=0.009498
Allele Frequency Aggregator Total Global 162730 G=0.997081 A=0.002919
Allele Frequency Aggregator European Sub 139684 G=0.998389 A=0.001611
Allele Frequency Aggregator Other Sub 11664 G=0.99674 A=0.00326
Allele Frequency Aggregator African Sub 7276 G=0.9720 A=0.0280
Allele Frequency Aggregator Latin American 2 Sub 2226 G=0.9978 A=0.0022
Allele Frequency Aggregator Latin American 1 Sub 1020 G=0.9971 A=0.0029
Allele Frequency Aggregator Asian Sub 676 G=1.000 A=0.000
Allele Frequency Aggregator South Asian Sub 184 G=1.000 A=0.000
gnomAD - Genomes Global Study-wide 140222 G=0.991150 A=0.008850
gnomAD - Genomes European Sub 75924 G=0.99854 A=0.00146
gnomAD - Genomes African Sub 42038 G=0.97419 A=0.02581
gnomAD - Genomes American Sub 13654 G=0.99758 A=0.00242
gnomAD - Genomes Ashkenazi Jewish Sub 3324 G=1.0000 A=0.0000
gnomAD - Genomes East Asian Sub 3130 G=1.0000 A=0.0000
gnomAD - Genomes Other Sub 2152 G=0.9944 A=0.0056
GO Exome Sequencing Project Global Study-wide 13006 G=0.99139 A=0.00861
GO Exome Sequencing Project European American Sub 8600 G=0.9985 A=0.0015
GO Exome Sequencing Project African American Sub 4406 G=0.9775 A=0.0225
1000Genomes Global Study-wide 5008 G=0.9946 A=0.0054
1000Genomes African Sub 1322 G=0.9811 A=0.0189
1000Genomes East Asian Sub 1008 G=1.0000 A=0.0000
1000Genomes Europe Sub 1006 G=0.9990 A=0.0010
1000Genomes South Asian Sub 978 G=1.000 A=0.000
1000Genomes American Sub 694 G=0.999 A=0.001
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.9991 A=0.0009
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.9990 A=0.0010
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.9989 A=0.0011
HapMap Global Study-wide 1620 G=0.9895 A=0.0105
HapMap American Sub 760 G=0.991 A=0.009
HapMap African Sub 686 G=0.987 A=0.013
HapMap Europe Sub 174 G=0.994 A=0.006
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.999 A=0.001
Qatari Global Study-wide 216 G=0.991 A=0.009
SGDP_PRJ Global Study-wide 2 G=0.5 A=0.5
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A C T
GRCh38.p13 chr 1 NC_000001.11:g.6462148= NC_000001.11:g.6462148G>A NC_000001.11:g.6462148G>C NC_000001.11:g.6462148G>T
GRCh37.p13 chr 1 NC_000001.10:g.6522208= NC_000001.10:g.6522208G>A NC_000001.10:g.6522208G>C NC_000001.10:g.6522208G>T
ESPN RefSeqGene (LRG_1281) NG_015866.1:g.42361= NG_015866.1:g.42361G>A NG_015866.1:g.42361G>C NG_015866.1:g.42361G>T
TNFRSF25 RefSeqGene NG_029910.1:g.9048= NG_029910.1:g.9048C>T NG_029910.1:g.9048C>G NG_029910.1:g.9048C>A
TNFRSF25 transcript variant 2 NM_003790.3:c.771= NM_003790.3:c.771C>T NM_003790.3:c.771C>G NM_003790.3:c.771C>A
TNFRSF25 transcript variant 2 NM_003790.2:c.771= NM_003790.2:c.771C>T NM_003790.2:c.771C>G NM_003790.2:c.771C>A
TNFRSF25 transcript variant 1 NM_148965.2:c.798= NM_148965.2:c.798C>T NM_148965.2:c.798C>G NM_148965.2:c.798C>A
TNFRSF25 transcript variant 1 NM_148965.1:c.798= NM_148965.1:c.798C>T NM_148965.1:c.798C>G NM_148965.1:c.798C>A
TNFRSF25 transcript variant 3 NM_148966.2:c.660= NM_148966.2:c.660C>T NM_148966.2:c.660C>G NM_148966.2:c.660C>A
TNFRSF25 transcript variant 3 NM_148966.1:c.660= NM_148966.1:c.660C>T NM_148966.1:c.660C>G NM_148966.1:c.660C>A
TNFRSF25 transcript variant 4 NM_148967.2:c.636= NM_148967.2:c.636C>T NM_148967.2:c.636C>G NM_148967.2:c.636C>A
TNFRSF25 transcript variant 4 NM_148967.1:c.636= NM_148967.1:c.636C>T NM_148967.1:c.636C>G NM_148967.1:c.636C>A
TNFRSF25 transcript variant 7 NM_148970.2:c.222= NM_148970.2:c.222C>T NM_148970.2:c.222C>G NM_148970.2:c.222C>A
TNFRSF25 transcript variant 7 NM_148970.1:c.222= NM_148970.1:c.222C>T NM_148970.1:c.222C>G NM_148970.1:c.222C>A
TNFRSF25 transcript variant 5 NM_148968.1:c.*58= NM_148968.1:c.*58C>T NM_148968.1:c.*58C>G NM_148968.1:c.*58C>A
TNFRSF25 transcript variant 6 NM_148969.1:c.*110= NM_148969.1:c.*110C>T NM_148969.1:c.*110C>G NM_148969.1:c.*110C>A
TNFRSF25 transcript variant 8 NM_148971.1:c.*58= NM_148971.1:c.*58C>T NM_148971.1:c.*58C>G NM_148971.1:c.*58C>A
TNFRSF25 transcript variant 9 NM_148972.1:c.*58= NM_148972.1:c.*58C>T NM_148972.1:c.*58C>G NM_148972.1:c.*58C>A
TNFRSF25 transcript variant 10 NM_148973.1:c.*58= NM_148973.1:c.*58C>T NM_148973.1:c.*58C>G NM_148973.1:c.*58C>A
TNFRSF25 transcript variant 11 NM_148974.1:c.355= NM_148974.1:c.355C>T NM_148974.1:c.355C>G NM_148974.1:c.355C>A
tumor necrosis factor receptor superfamily member 25 isoform 2 precursor NP_003781.1:p.Ser257= NP_003781.1:p.Ser257= NP_003781.1:p.Ser257Arg NP_003781.1:p.Ser257Arg
tumor necrosis factor receptor superfamily member 25 isoform 1 precursor NP_683866.1:p.Ser266= NP_683866.1:p.Ser266= NP_683866.1:p.Ser266Arg NP_683866.1:p.Ser266Arg
tumor necrosis factor receptor superfamily member 25 isoform 3 precursor NP_683867.1:p.Ser220= NP_683867.1:p.Ser220= NP_683867.1:p.Ser220Arg NP_683867.1:p.Ser220Arg
tumor necrosis factor receptor superfamily member 25 isoform 4 precursor NP_683868.1:p.Ser212= NP_683868.1:p.Ser212= NP_683868.1:p.Ser212Arg NP_683868.1:p.Ser212Arg
tumor necrosis factor receptor superfamily member 25 isoform 7 precursor NP_683871.1:p.Ser74= NP_683871.1:p.Ser74= NP_683871.1:p.Ser74Arg NP_683871.1:p.Ser74Arg
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

60 SubSNP, 16 Frequency, 1 ClinVar submissions
No Submitter Submission ID Date (Build)
1 APPLERA_GI ss48420540 Mar 13, 2006 (126)
2 EGP_SNPS ss70457418 May 17, 2007 (127)
3 ILLUMINA ss74974787 Dec 07, 2007 (129)
4 KRIBB_YJKIM ss119909413 Dec 01, 2009 (131)
5 ILLUMINA ss160620626 Dec 01, 2009 (131)
6 ILLUMINA ss173586459 Jul 04, 2010 (132)
7 1000GENOMES ss217405820 Jul 14, 2010 (132)
8 1000GENOMES ss217410966 Jul 14, 2010 (132)
9 1000GENOMES ss328391771 May 09, 2011 (134)
10 NHLBI-ESP ss341928652 May 09, 2011 (134)
11 ILLUMINA ss480780144 May 04, 2012 (137)
12 ILLUMINA ss480795984 May 04, 2012 (137)
13 ILLUMINA ss481697144 Sep 08, 2015 (146)
14 ILLUMINA ss485184818 May 04, 2012 (137)
15 1000GENOMES ss489717669 May 04, 2012 (137)
16 CLINSEQ_SNP ss491583246 May 04, 2012 (137)
17 ILLUMINA ss537173203 Sep 08, 2015 (146)
18 ILLUMINA ss778891120 Sep 08, 2015 (146)
19 ILLUMINA ss783038551 Sep 08, 2015 (146)
20 ILLUMINA ss783997980 Sep 08, 2015 (146)
21 ILLUMINA ss832296259 Sep 08, 2015 (146)
22 ILLUMINA ss834352227 Sep 08, 2015 (146)
23 EVA-GONL ss974820701 Aug 21, 2014 (142)
24 1000GENOMES ss1289542558 Aug 21, 2014 (142)
25 EVA_DECODE ss1584178910 Apr 01, 2015 (144)
26 EVA_UK10K_ALSPAC ss1599475846 Apr 01, 2015 (144)
27 EVA_UK10K_TWINSUK ss1642469879 Apr 01, 2015 (144)
28 EVA_EXAC ss1685271814 Apr 01, 2015 (144)
29 EVA_EXAC ss1685271815 Apr 01, 2015 (144)
30 ILLUMINA ss1751929334 Sep 08, 2015 (146)
31 WEILL_CORNELL_DGM ss1918018187 Feb 12, 2016 (147)
32 HUMAN_LONGEVITY ss2159754971 Dec 20, 2016 (150)
33 TOPMED ss2321912105 Dec 20, 2016 (150)
34 ILLUMINA ss2632472441 Nov 08, 2017 (151)
35 GNOMAD ss2731072565 Nov 08, 2017 (151)
36 GNOMAD ss2746200391 Nov 08, 2017 (151)
37 GNOMAD ss2751216177 Nov 08, 2017 (151)
38 SWEGEN ss2986238906 Nov 08, 2017 (151)
39 TOPMED ss3067669456 Nov 08, 2017 (151)
40 ILLUMINA ss3626017882 Oct 11, 2018 (152)
41 ILLUMINA ss3630511482 Oct 11, 2018 (152)
42 ILLUMINA ss3632879562 Oct 11, 2018 (152)
43 ILLUMINA ss3633573282 Oct 11, 2018 (152)
44 ILLUMINA ss3634304801 Oct 11, 2018 (152)
45 ILLUMINA ss3635267431 Oct 11, 2018 (152)
46 ILLUMINA ss3635981168 Oct 11, 2018 (152)
47 ILLUMINA ss3637017794 Oct 11, 2018 (152)
48 ILLUMINA ss3637735202 Oct 11, 2018 (152)
49 ILLUMINA ss3640012166 Oct 11, 2018 (152)
50 ILLUMINA ss3642749262 Oct 11, 2018 (152)
51 EGCUT_WGS ss3654338905 Jul 12, 2019 (153)
52 EVA_DECODE ss3686092691 Jul 12, 2019 (153)
53 ILLUMINA ss3744605780 Jul 12, 2019 (153)
54 ILLUMINA ss3772107431 Jul 12, 2019 (153)
55 EVA ss3823553067 Apr 25, 2020 (154)
56 EVA ss3825551831 Apr 25, 2020 (154)
57 EVA ss3826006668 Apr 25, 2020 (154)
58 SGDP_PRJ ss3848120355 Apr 25, 2020 (154)
59 EVA ss3986096294 Apr 25, 2021 (155)
60 TOPMED ss4438023513 Apr 25, 2021 (155)
61 1000Genomes NC_000001.10 - 6522208 Oct 11, 2018 (152)
62 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 6522208 Oct 11, 2018 (152)
63 Genetic variation in the Estonian population NC_000001.10 - 6522208 Oct 11, 2018 (152)
64 ExAC

Submission ignored due to conflicting rows:
Row 4448819 (NC_000001.10:6522207:G:G 119270/119684, NC_000001.10:6522207:G:A 414/119684)
Row 4448820 (NC_000001.10:6522207:G:G 119683/119684, NC_000001.10:6522207:G:C 1/119684)

- Oct 11, 2018 (152)
65 ExAC

Submission ignored due to conflicting rows:
Row 4448819 (NC_000001.10:6522207:G:G 119270/119684, NC_000001.10:6522207:G:A 414/119684)
Row 4448820 (NC_000001.10:6522207:G:G 119683/119684, NC_000001.10:6522207:G:C 1/119684)

- Oct 11, 2018 (152)
66 gnomAD - Genomes NC_000001.11 - 6462148 Apr 25, 2021 (155)
67 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 87134 (NC_000001.10:6522207:G:G 247458/248214, NC_000001.10:6522207:G:A 756/248214)
Row 87135 (NC_000001.10:6522207:G:G 248213/248214, NC_000001.10:6522207:G:C 1/248214)

- Jul 12, 2019 (153)
68 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 87134 (NC_000001.10:6522207:G:G 247458/248214, NC_000001.10:6522207:G:A 756/248214)
Row 87135 (NC_000001.10:6522207:G:G 248213/248214, NC_000001.10:6522207:G:C 1/248214)

- Jul 12, 2019 (153)
69 GO Exome Sequencing Project NC_000001.10 - 6522208 Oct 11, 2018 (152)
70 Genome of the Netherlands Release 5 NC_000001.10 - 6522208 Apr 25, 2020 (154)
71 HapMap NC_000001.11 - 6462148 Apr 25, 2020 (154)
72 Qatari NC_000001.10 - 6522208 Apr 25, 2020 (154)
73 SGDP_PRJ NC_000001.10 - 6522208 Apr 25, 2020 (154)
74 TopMed NC_000001.11 - 6462148 Apr 25, 2021 (155)
75 UK 10K study - Twins NC_000001.10 - 6522208 Oct 11, 2018 (152)
76 ALFA NC_000001.11 - 6462148 Apr 25, 2021 (155)
77 ClinVar RCV000892331.1 Apr 25, 2020 (154)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss217405820, ss217410966, ss480780144, ss491583246, ss1584178910, ss3642749262 NC_000001.9:6444794:G:A NC_000001.11:6462147:G:A (self)
213389, 106218, 77153, 11799, 46400, 60117, 137335, 106218, ss328391771, ss341928652, ss480795984, ss481697144, ss485184818, ss489717669, ss537173203, ss778891120, ss783038551, ss783997980, ss832296259, ss834352227, ss974820701, ss1289542558, ss1599475846, ss1642469879, ss1685271814, ss1751929334, ss1918018187, ss2321912105, ss2632472441, ss2731072565, ss2746200391, ss2751216177, ss2986238906, ss3626017882, ss3630511482, ss3632879562, ss3633573282, ss3634304801, ss3635267431, ss3635981168, ss3637017794, ss3637735202, ss3640012166, ss3654338905, ss3744605780, ss3772107431, ss3823553067, ss3825551831, ss3826006668, ss3848120355, ss3986096294 NC_000001.10:6522207:G:A NC_000001.11:6462147:G:A (self)
RCV000892331.1, 1468909, 7785, 1021072, 1629848, 1331947513, ss2159754971, ss3067669456, ss3686092691, ss4438023513 NC_000001.11:6462147:G:A NC_000001.11:6462147:G:A (self)
ss48420540, ss70457418, ss74974787, ss119909413, ss160620626, ss173586459 NT_021937.19:2526939:G:A NC_000001.11:6462147:G:A (self)
ss1685271815, ss2731072565 NC_000001.10:6522207:G:C NC_000001.11:6462147:G:C (self)
ss2731072565 NC_000001.10:6522207:G:T NC_000001.11:6462147:G:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs34221914

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad