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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs61733845

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr1:1182895 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>A / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.165488 (43803/264690, TOPMED)
T=0.156453 (21916/140080, GnomAD)
T=0.06894 (4203/60962, ALFA) (+ 16 more)
T=0.22593 (9175/40610, ExAC)
T=0.06193 (1038/16760, 8.3KJPN)
T=0.16237 (2106/12970, GO-ESP)
T=0.1857 (930/5008, 1000G)
T=0.0437 (196/4480, Estonian)
T=0.0431 (166/3854, ALSPAC)
T=0.0456 (169/3708, TWINSUK)
T=0.0707 (207/2928, KOREAN)
T=0.029 (18/616, Vietnamese)
T=0.060 (36/600, NorthernSweden)
T=0.051 (27/534, MGP)
T=0.181 (39/216, Qatari)
C=0.418 (56/134, SGDP_PRJ)
T=0.07 (3/40, GENOME_DK)
C=0.5 (1/2, Siberian)
T=0.5 (1/2, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TTLL10 : Stop Gained
Publications
0 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 1 NC_000001.11:g.1182895C>A
GRCh38.p13 chr 1 NC_000001.11:g.1182895C>T
GRCh37.p13 chr 1 NC_000001.10:g.1118275C>A
GRCh37.p13 chr 1 NC_000001.10:g.1118275C>T
Gene: TTLL10, tubulin tyrosine ligase like 10 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
TTLL10 transcript variant 2 NM_153254.3:c.717C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 2 NP_694986.2:p.Cys239Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant 2 NM_153254.3:c.717C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 2 NP_694986.2:p.Cys239= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant 1 NM_001130045.2:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 1 NP_001123517.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant 1 NM_001130045.2:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 1 NP_001123517.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant 3 NM_001371649.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 1 NP_001358578.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant 3 NM_001371649.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform 1 NP_001358578.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X10 XM_005244738.1:c.717C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X8 XP_005244795.1:p.Cys239Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X10 XM_005244738.1:c.717C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X8 XP_005244795.1:p.Cys239= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X1 XM_017000906.1:c.855C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X1 XP_016856395.1:p.Cys285Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X1 XM_017000906.1:c.855C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X1 XP_016856395.1:p.Cys285= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X2 XM_017000907.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X2 XP_016856396.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X2 XM_017000907.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X2 XP_016856396.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X3 XM_017000908.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X3 XP_016856397.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X3 XM_017000908.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X3 XP_016856397.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X4 XM_017000909.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X4 XP_016856398.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X4 XM_017000909.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X4 XP_016856398.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X6 XM_017000911.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X6 XP_016856400.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X6 XM_017000911.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X6 XP_016856400.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X7 XM_011541177.2:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X7 XP_011539479.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X7 XM_011541177.2:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X7 XP_011539479.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X8 XM_017000912.1:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X7 XP_016856401.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X8 XM_017000912.1:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X7 XP_016856401.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X5 XM_017000910.2:c.936C>A C [TGC] > * [TGA] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X5 XP_016856399.1:p.Cys312Ter C (Cys) > * (Ter) Stop Gained
TTLL10 transcript variant X5 XM_017000910.2:c.936C>T C [TGC] > C [TGT] Coding Sequence Variant
inactive polyglycylase TTLL10 isoform X5 XP_016856399.1:p.Cys312= C (Cys) > C (Cys) Synonymous Variant
TTLL10 transcript variant X9 XR_001737088.1:n.1246C>A N/A Non Coding Transcript Variant
TTLL10 transcript variant X9 XR_001737088.1:n.1246C>T N/A Non Coding Transcript Variant
TTLL10 transcript variant X11 XR_001737089.1:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 60962 C=0.93106 T=0.06894
European Sub 47508 C=0.95498 T=0.04502
African Sub 3750 C=0.6517 T=0.3483
African Others Sub 132 C=0.477 T=0.523
African American Sub 3618 C=0.6581 T=0.3419
Asian Sub 182 C=0.956 T=0.044
East Asian Sub 124 C=0.952 T=0.048
Other Asian Sub 58 C=0.97 T=0.03
Latin American 1 Sub 518 C=0.824 T=0.176
Latin American 2 Sub 702 C=0.863 T=0.137
South Asian Sub 114 C=0.807 T=0.193
Other Sub 8188 C=0.9339 T=0.0661


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.834512 T=0.165488
gnomAD - Genomes Global Study-wide 140080 C=0.843547 T=0.156453
gnomAD - Genomes European Sub 75898 C=0.95331 T=0.04669
gnomAD - Genomes African Sub 41918 C=0.61463 T=0.38537
gnomAD - Genomes American Sub 13660 C=0.88455 T=0.11545
gnomAD - Genomes Ashkenazi Jewish Sub 3320 C=0.9551 T=0.0449
gnomAD - Genomes East Asian Sub 3132 C=0.9480 T=0.0520
gnomAD - Genomes Other Sub 2152 C=0.8471 T=0.1529
ExAC Global Study-wide 40610 C=0.77407 T=0.22593
ExAC Europe Sub 19478 C=0.88140 T=0.11860
ExAC Asian Sub 11686 C=0.73396 T=0.26604
ExAC African Sub 5534 C=0.5300 T=0.4700
ExAC American Sub 3568 C=0.6937 T=0.3063
ExAC Other Sub 344 C=0.820 T=0.180
8.3KJPN JAPANESE Study-wide 16760 C=0.93807 T=0.06193
GO Exome Sequencing Project Global Study-wide 12970 C=0.83763 T=0.16237
GO Exome Sequencing Project European American Sub 8584 C=0.9513 T=0.0487
GO Exome Sequencing Project African American Sub 4386 C=0.6151 T=0.3849
1000Genomes Global Study-wide 5008 C=0.8143 T=0.1857
1000Genomes African Sub 1322 C=0.5877 T=0.4123
1000Genomes East Asian Sub 1008 C=0.9593 T=0.0407
1000Genomes Europe Sub 1006 C=0.9553 T=0.0447
1000Genomes South Asian Sub 978 C=0.780 T=0.220
1000Genomes American Sub 694 C=0.879 T=0.121
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.9563 T=0.0437
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.9569 T=0.0431
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.9544 T=0.0456
KOREAN population from KRGDB KOREAN Study-wide 2928 C=0.9293 T=0.0707
A Vietnamese Genetic Variation Database Global Study-wide 616 C=0.971 T=0.029
Northern Sweden ACPOP Study-wide 600 C=0.940 T=0.060
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 C=0.949 T=0.051
Qatari Global Study-wide 216 C=0.819 T=0.181
SGDP_PRJ Global Study-wide 134 C=0.418 T=0.582
The Danish reference pan genome Danish Study-wide 40 C=0.93 T=0.07
Siberian Global Study-wide 2 C=0.5 T=0.5
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= A T
GRCh38.p13 chr 1 NC_000001.11:g.1182895= NC_000001.11:g.1182895C>A NC_000001.11:g.1182895C>T
GRCh37.p13 chr 1 NC_000001.10:g.1118275= NC_000001.10:g.1118275C>A NC_000001.10:g.1118275C>T
TTLL10 transcript variant 2 NM_153254.3:c.717= NM_153254.3:c.717C>A NM_153254.3:c.717C>T
TTLL10 transcript variant 2 NM_153254.2:c.717= NM_153254.2:c.717C>A NM_153254.2:c.717C>T
TTLL10 transcript variant X7 XM_011541177.2:c.936= XM_011541177.2:c.936C>A XM_011541177.2:c.936C>T
TTLL10 transcript variant 1 NM_001130045.2:c.936= NM_001130045.2:c.936C>A NM_001130045.2:c.936C>T
TTLL10 transcript variant 1 NM_001130045.1:c.936= NM_001130045.1:c.936C>A NM_001130045.1:c.936C>T
TTLL10 transcript variant X5 XM_017000910.2:c.936= XM_017000910.2:c.936C>A XM_017000910.2:c.936C>T
TTLL10 transcript variant X1 XM_017000906.1:c.855= XM_017000906.1:c.855C>A XM_017000906.1:c.855C>T
TTLL10 transcript variant 3 NM_001371649.1:c.936= NM_001371649.1:c.936C>A NM_001371649.1:c.936C>T
TTLL10 transcript variant X8 XM_017000912.1:c.936= XM_017000912.1:c.936C>A XM_017000912.1:c.936C>T
TTLL10 transcript variant X4 XM_017000909.1:c.936= XM_017000909.1:c.936C>A XM_017000909.1:c.936C>T
TTLL10 transcript variant X10 XM_005244738.1:c.717= XM_005244738.1:c.717C>A XM_005244738.1:c.717C>T
TTLL10 transcript variant X9 XR_001737088.1:n.1246= XR_001737088.1:n.1246C>A XR_001737088.1:n.1246C>T
TTLL10 transcript variant X3 XM_017000908.1:c.936= XM_017000908.1:c.936C>A XM_017000908.1:c.936C>T
TTLL10 transcript variant X2 XM_017000907.1:c.936= XM_017000907.1:c.936C>A XM_017000907.1:c.936C>T
TTLL10 transcript variant X6 XM_017000911.1:c.936= XM_017000911.1:c.936C>A XM_017000911.1:c.936C>T
inactive polyglycylase TTLL10 isoform 2 NP_694986.2:p.Cys239= NP_694986.2:p.Cys239Ter NP_694986.2:p.Cys239=
inactive polyglycylase TTLL10 isoform X7 XP_011539479.1:p.Cys312= XP_011539479.1:p.Cys312Ter XP_011539479.1:p.Cys312=
inactive polyglycylase TTLL10 isoform 1 NP_001123517.1:p.Cys312= NP_001123517.1:p.Cys312Ter NP_001123517.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X5 XP_016856399.1:p.Cys312= XP_016856399.1:p.Cys312Ter XP_016856399.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X1 XP_016856395.1:p.Cys285= XP_016856395.1:p.Cys285Ter XP_016856395.1:p.Cys285=
inactive polyglycylase TTLL10 isoform 1 NP_001358578.1:p.Cys312= NP_001358578.1:p.Cys312Ter NP_001358578.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X7 XP_016856401.1:p.Cys312= XP_016856401.1:p.Cys312Ter XP_016856401.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X4 XP_016856398.1:p.Cys312= XP_016856398.1:p.Cys312Ter XP_016856398.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X8 XP_005244795.1:p.Cys239= XP_005244795.1:p.Cys239Ter XP_005244795.1:p.Cys239=
inactive polyglycylase TTLL10 isoform X3 XP_016856397.1:p.Cys312= XP_016856397.1:p.Cys312Ter XP_016856397.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X2 XP_016856396.1:p.Cys312= XP_016856396.1:p.Cys312Ter XP_016856396.1:p.Cys312=
inactive polyglycylase TTLL10 isoform X6 XP_016856400.1:p.Cys312= XP_016856400.1:p.Cys312Ter XP_016856400.1:p.Cys312=
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

74 SubSNP, 20 Frequency submissions
No Submitter Submission ID Date (Build)
1 CORNELL ss86265976 Mar 23, 2008 (129)
2 SEATTLESEQ ss159695683 Dec 01, 2009 (131)
3 BUSHMAN ss197889648 Jul 04, 2010 (132)
4 1000GENOMES ss210449723 Jul 14, 2010 (132)
5 1000GENOMES ss217314372 Jul 14, 2010 (132)
6 1000GENOMES ss217390810 Jul 14, 2010 (132)
7 1000GENOMES ss217392048 Jul 14, 2010 (132)
8 1000GENOMES ss217399942 Jul 14, 2010 (132)
9 1000GENOMES ss217405728 Jul 14, 2010 (132)
10 1000GENOMES ss217410446 Jul 14, 2010 (132)
11 1000GENOMES ss217410877 Jul 14, 2010 (132)
12 1000GENOMES ss218192283 Jul 14, 2010 (132)
13 1000GENOMES ss230396637 Jul 14, 2010 (132)
14 1000GENOMES ss238116133 Jul 15, 2010 (132)
15 GMI ss275682617 May 04, 2012 (137)
16 NHLBI-ESP ss341924407 May 09, 2011 (134)
17 ILLUMINA ss482068551 May 04, 2012 (137)
18 ILLUMINA ss483113537 May 04, 2012 (137)
19 1000GENOMES ss489714615 May 04, 2012 (137)
20 CLINSEQ_SNP ss491581878 May 04, 2012 (137)
21 ILLUMINA ss535336768 Sep 08, 2015 (146)
22 TISHKOFF ss553714405 Apr 25, 2013 (138)
23 SSMP ss647518894 Apr 25, 2013 (138)
24 ILLUMINA ss779497977 Sep 08, 2015 (146)
25 ILLUMINA ss782000089 Sep 08, 2015 (146)
26 ILLUMINA ss834968180 Sep 08, 2015 (146)
27 JMKIDD_LAB ss974432495 Aug 21, 2014 (142)
28 EVA-GONL ss974772665 Aug 21, 2014 (142)
29 JMKIDD_LAB ss1067414445 Aug 21, 2014 (142)
30 JMKIDD_LAB ss1067614019 Aug 21, 2014 (142)
31 1000GENOMES ss1289353059 Aug 21, 2014 (142)
32 DDI ss1425686011 Apr 01, 2015 (144)
33 EVA_GENOME_DK ss1573852247 Apr 01, 2015 (144)
34 EVA_DECODE ss1584132597 Apr 01, 2015 (144)
35 EVA_UK10K_ALSPAC ss1599383812 Apr 01, 2015 (144)
36 EVA_UK10K_TWINSUK ss1642377845 Apr 01, 2015 (144)
37 EVA_EXAC ss1685225904 Apr 01, 2015 (144)
38 EVA_MGP ss1710883777 Apr 01, 2015 (144)
39 HAMMER_LAB ss1793718202 Sep 08, 2015 (146)
40 WEILL_CORNELL_DGM ss1917964751 Feb 12, 2016 (147)
41 JJLAB ss2019500202 Sep 14, 2016 (149)
42 ILLUMINA ss2094839597 Dec 20, 2016 (150)
43 ILLUMINA ss2094948848 Dec 20, 2016 (150)
44 USC_VALOUEV ss2147487081 Dec 20, 2016 (150)
45 HUMAN_LONGEVITY ss2159391723 Dec 20, 2016 (150)
46 TOPMED ss2321530955 Dec 20, 2016 (150)
47 SYSTEMSBIOZJU ss2624265687 Nov 08, 2017 (151)
48 ILLUMINA ss2632465823 Nov 08, 2017 (151)
49 GRF ss2697377869 Nov 08, 2017 (151)
50 GNOMAD ss2731000192 Nov 08, 2017 (151)
51 GNOMAD ss2746174336 Nov 08, 2017 (151)
52 GNOMAD ss2750679465 Nov 08, 2017 (151)
53 SWEGEN ss2986155506 Nov 08, 2017 (151)
54 TOPMED ss3066488500 Nov 08, 2017 (151)
55 CSHL ss3343274663 Nov 08, 2017 (151)
56 ILLUMINA ss3626007213 Oct 11, 2018 (152)
57 ILLUMINA ss3630505833 Oct 11, 2018 (152)
58 OMUKHERJEE_ADBS ss3646219025 Oct 11, 2018 (152)
59 ILLUMINA ss3651365925 Oct 11, 2018 (152)
60 EGCUT_WGS ss3654266546 Jul 12, 2019 (153)
61 EVA_DECODE ss3685999381 Jul 12, 2019 (153)
62 ACPOP ss3726719319 Jul 12, 2019 (153)
63 EVA ss3745725099 Jul 12, 2019 (153)
64 KHV_HUMAN_GENOMES ss3798747748 Jul 12, 2019 (153)
65 EVA ss3823543097 Apr 25, 2020 (154)
66 EVA ss3825549327 Apr 25, 2020 (154)
67 EVA ss3825982903 Apr 25, 2020 (154)
68 SGDP_PRJ ss3848005895 Apr 25, 2020 (154)
69 KRGDB ss3892848867 Apr 25, 2020 (154)
70 FSA-LAB ss3983910765 Apr 25, 2021 (155)
71 EVA ss3986091323 Apr 25, 2021 (155)
72 TOPMED ss4436540127 Apr 25, 2021 (155)
73 TOMMO_GENOMICS ss5142070186 Apr 25, 2021 (155)
74 EVA ss5236862468 Apr 25, 2021 (155)
75 1000Genomes NC_000001.10 - 1118275 Oct 11, 2018 (152)
76 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 1118275 Oct 11, 2018 (152)
77 Genetic variation in the Estonian population NC_000001.10 - 1118275 Oct 11, 2018 (152)
78 ExAC NC_000001.10 - 1118275 Oct 11, 2018 (152)
79 The Danish reference pan genome NC_000001.10 - 1118275 Apr 25, 2020 (154)
80 gnomAD - Genomes NC_000001.11 - 1182895 Apr 25, 2021 (155)
81 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 15019 (NC_000001.10:1118274:C:C 209523/209524, NC_000001.10:1118274:C:A 1/209524)
Row 15020 (NC_000001.10:1118274:C:C 187136/209524, NC_000001.10:1118274:C:T 22388/209524)

- Jul 12, 2019 (153)
82 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 15019 (NC_000001.10:1118274:C:C 209523/209524, NC_000001.10:1118274:C:A 1/209524)
Row 15020 (NC_000001.10:1118274:C:C 187136/209524, NC_000001.10:1118274:C:T 22388/209524)

- Jul 12, 2019 (153)
83 GO Exome Sequencing Project NC_000001.10 - 1118275 Oct 11, 2018 (152)
84 KOREAN population from KRGDB NC_000001.10 - 1118275 Apr 25, 2020 (154)
85 Medical Genome Project healthy controls from Spanish population NC_000001.10 - 1118275 Apr 25, 2020 (154)
86 Northern Sweden NC_000001.10 - 1118275 Jul 12, 2019 (153)
87 Qatari NC_000001.10 - 1118275 Apr 25, 2020 (154)
88 SGDP_PRJ NC_000001.10 - 1118275 Apr 25, 2020 (154)
89 Siberian NC_000001.10 - 1118275 Apr 25, 2020 (154)
90 8.3KJPN NC_000001.10 - 1118275 Apr 25, 2021 (155)
91 TopMed NC_000001.11 - 1182895 Apr 25, 2021 (155)
92 UK 10K study - Twins NC_000001.10 - 1118275 Oct 11, 2018 (152)
93 A Vietnamese Genetic Variation Database NC_000001.10 - 1118275 Jul 12, 2019 (153)
94 ALFA NC_000001.11 - 1182895 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss2731000192 NC_000001.10:1118274:C:A NC_000001.11:1182894:C:A (self)
ss197889648, ss210449723, ss217314372, ss217390810, ss217392048, ss217399942, ss217405728, ss217410446, ss217410877, ss275682617, ss482068551, ss491581878, ss1584132597, ss2094839597 NC_000001.9:1108137:C:T NC_000001.11:1182894:C:T (self)
18245, 6256, 4794, 4399582, 1359481, 1834, 26261, 529, 4184, 6681, 22875, 3435, 39493, 6256, 1374, ss218192283, ss230396637, ss238116133, ss341924407, ss483113537, ss489714615, ss535336768, ss553714405, ss647518894, ss779497977, ss782000089, ss834968180, ss974432495, ss974772665, ss1067414445, ss1067614019, ss1289353059, ss1425686011, ss1573852247, ss1599383812, ss1642377845, ss1685225904, ss1710883777, ss1793718202, ss1917964751, ss2019500202, ss2094948848, ss2147487081, ss2321530955, ss2624265687, ss2632465823, ss2697377869, ss2731000192, ss2746174336, ss2750679465, ss2986155506, ss3343274663, ss3626007213, ss3630505833, ss3646219025, ss3651365925, ss3654266546, ss3726719319, ss3745725099, ss3823543097, ss3825549327, ss3825982903, ss3848005895, ss3892848867, ss3983910765, ss3986091323, ss5142070186 NC_000001.10:1118274:C:T NC_000001.11:1182894:C:T (self)
159483, 84087, 146462, 14555922925, ss2159391723, ss3066488500, ss3685999381, ss3798747748, ss4436540127, ss5236862468 NC_000001.11:1182894:C:T NC_000001.11:1182894:C:T (self)
ss86265976, ss159695683 NT_004350.19:596906:C:T NC_000001.11:1182894:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs61733845

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad