Skip to main page content
Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs6687776

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr1:1095185 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
T=0.279247 (73914/264690, TOPMED)
T=0.182321 (45142/247596, ALFA)
T=0.275693 (38602/140018, GnomAD) (+ 19 more)
T=0.33842 (26632/78696, PAGE_STUDY)
T=0.17393 (2915/16760, 8.3KJPN)
T=0.3067 (1536/5008, 1000G)
T=0.1752 (785/4480, Estonian)
T=0.1448 (558/3854, ALSPAC)
T=0.1597 (592/3708, TWINSUK)
T=0.1980 (580/2930, KOREAN)
T=0.2250 (469/2084, HGDP_Stanford)
T=0.3259 (616/1890, HapMap)
T=0.2020 (370/1832, Korea1K)
T=0.143 (143/998, GoNL)
T=0.155 (119/766, PRJEB37584)
T=0.143 (86/600, NorthernSweden)
C=0.408 (93/228, SGDP_PRJ)
T=0.329 (71/216, Qatari)
T=0.140 (30/214, Vietnamese)
T=0.14 (10/72, Ancient Sardinia)
T=0.17 (7/40, GENOME_DK)
C=0.33 (8/24, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
C1orf159 : Intron Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 1 NC_000001.11:g.1095185C>T
GRCh37.p13 chr 1 NC_000001.10:g.1030565C>T
Gene: C1orf159, chromosome 1 open reading frame 159 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
C1orf159 transcript variant 1 NM_001330306.2:c.-135-308…

NM_001330306.2:c.-135-3082G>A

N/A Intron Variant
C1orf159 transcript variant 3 NM_001363525.2:c.-135-308…

NM_001363525.2:c.-135-3082G>A

N/A Intron Variant
C1orf159 transcript variant 2 NM_017891.5:c.-135-3082G>A N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 247596 C=0.817679 T=0.182321
European Sub 216026 C=0.835585 T=0.164415
African Sub 9788 C=0.4950 T=0.5050
African Others Sub 350 C=0.446 T=0.554
African American Sub 9438 C=0.4968 T=0.5032
Asian Sub 778 C=0.823 T=0.177
East Asian Sub 634 C=0.833 T=0.167
Other Asian Sub 144 C=0.778 T=0.222
Latin American 1 Sub 844 C=0.722 T=0.278
Latin American 2 Sub 6902 C=0.8144 T=0.1856
South Asian Sub 5048 C=0.7565 T=0.2435
Other Sub 8210 C=0.7810 T=0.2190


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 C=0.720753 T=0.279247
Allele Frequency Aggregator Total Global 247596 C=0.817679 T=0.182321
Allele Frequency Aggregator European Sub 216026 C=0.835585 T=0.164415
Allele Frequency Aggregator African Sub 9788 C=0.4950 T=0.5050
Allele Frequency Aggregator Other Sub 8210 C=0.7810 T=0.2190
Allele Frequency Aggregator Latin American 2 Sub 6902 C=0.8144 T=0.1856
Allele Frequency Aggregator South Asian Sub 5048 C=0.7565 T=0.2435
Allele Frequency Aggregator Latin American 1 Sub 844 C=0.722 T=0.278
Allele Frequency Aggregator Asian Sub 778 C=0.823 T=0.177
gnomAD - Genomes Global Study-wide 140018 C=0.724307 T=0.275693
gnomAD - Genomes European Sub 75888 C=0.83029 T=0.16971
gnomAD - Genomes African Sub 41898 C=0.49800 T=0.50200
gnomAD - Genomes American Sub 13642 C=0.79189 T=0.20811
gnomAD - Genomes Ashkenazi Jewish Sub 3320 C=0.7973 T=0.2027
gnomAD - Genomes East Asian Sub 3126 C=0.8074 T=0.1926
gnomAD - Genomes Other Sub 2144 C=0.7313 T=0.2687
The PAGE Study Global Study-wide 78696 C=0.66158 T=0.33842
The PAGE Study AfricanAmerican Sub 32514 C=0.50031 T=0.49969
The PAGE Study Mexican Sub 10810 C=0.80546 T=0.19454
The PAGE Study Asian Sub 8316 C=0.8197 T=0.1803
The PAGE Study PuertoRican Sub 7918 C=0.7350 T=0.2650
The PAGE Study NativeHawaiian Sub 4534 C=0.7766 T=0.2234
The PAGE Study Cuban Sub 4228 C=0.7715 T=0.2285
The PAGE Study Dominican Sub 3828 C=0.6693 T=0.3307
The PAGE Study CentralAmerican Sub 2450 C=0.7641 T=0.2359
The PAGE Study SouthAmerican Sub 1982 C=0.8098 T=0.1902
The PAGE Study NativeAmerican Sub 1260 C=0.7746 T=0.2254
The PAGE Study SouthAsian Sub 856 C=0.765 T=0.235
8.3KJPN JAPANESE Study-wide 16760 C=0.82607 T=0.17393
1000Genomes Global Study-wide 5008 C=0.6933 T=0.3067
1000Genomes African Sub 1322 C=0.3964 T=0.6036
1000Genomes East Asian Sub 1008 C=0.8125 T=0.1875
1000Genomes Europe Sub 1006 C=0.8340 T=0.1660
1000Genomes South Asian Sub 978 C=0.741 T=0.259
1000Genomes American Sub 694 C=0.814 T=0.186
Genetic variation in the Estonian population Estonian Study-wide 4480 C=0.8248 T=0.1752
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.8552 T=0.1448
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=0.8403 T=0.1597
KOREAN population from KRGDB KOREAN Study-wide 2930 C=0.8020 T=0.1980
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 C=0.7750 T=0.2250
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 C=0.834 T=0.166
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 C=0.816 T=0.184
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 C=0.737 T=0.263
HGDP-CEPH-db Supplement 1 Europe Sub 320 C=0.838 T=0.163
HGDP-CEPH-db Supplement 1 Africa Sub 242 C=0.496 T=0.504
HGDP-CEPH-db Supplement 1 America Sub 216 C=0.829 T=0.171
HGDP-CEPH-db Supplement 1 Oceania Sub 72 C=0.83 T=0.17
HapMap Global Study-wide 1890 C=0.6741 T=0.3259
HapMap American Sub 770 C=0.790 T=0.210
HapMap African Sub 690 C=0.467 T=0.533
HapMap Asian Sub 254 C=0.783 T=0.217
HapMap Europe Sub 176 C=0.824 T=0.176
Korean Genome Project KOREAN Study-wide 1832 C=0.7980 T=0.2020
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 C=0.857 T=0.143
CNV burdens in cranial meningiomas Global Study-wide 766 C=0.845 T=0.155
CNV burdens in cranial meningiomas CRM Sub 766 C=0.845 T=0.155
Northern Sweden ACPOP Study-wide 600 C=0.857 T=0.143
SGDP_PRJ Global Study-wide 228 C=0.408 T=0.592
Qatari Global Study-wide 216 C=0.671 T=0.329
A Vietnamese Genetic Variation Database Global Study-wide 214 C=0.860 T=0.140
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 72 C=0.86 T=0.14
The Danish reference pan genome Danish Study-wide 40 C=0.82 T=0.17
Siberian Global Study-wide 24 C=0.33 T=0.67
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= T
GRCh38.p13 chr 1 NC_000001.11:g.1095185= NC_000001.11:g.1095185C>T
GRCh37.p13 chr 1 NC_000001.10:g.1030565= NC_000001.10:g.1030565C>T
C1orf159 transcript variant 1 NM_001330306.2:c.-135-3082= NM_001330306.2:c.-135-3082G>A
C1orf159 transcript variant 3 NM_001363525.2:c.-135-3082= NM_001363525.2:c.-135-3082G>A
C1orf159 transcript variant 2 NM_017891.4:c.-135-3082= NM_017891.4:c.-135-3082G>A
C1orf159 transcript variant 2 NM_017891.5:c.-135-3082= NM_017891.5:c.-135-3082G>A
C1orf159 transcript variant X1 XM_005244764.1:c.-135-3082= XM_005244764.1:c.-135-3082G>A
C1orf159 transcript variant X16 XM_005244765.1:c.-135-3082= XM_005244765.1:c.-135-3082G>A
C1orf159 transcript variant X3 XM_005244766.1:c.-135-3082= XM_005244766.1:c.-135-3082G>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

119 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 BCM_SSAHASNP ss9872208 Jul 11, 2003 (116)
2 SC_SNP ss15400814 Feb 27, 2004 (120)
3 ABI ss41187742 Mar 14, 2006 (126)
4 ILLUMINA ss66623403 Nov 30, 2006 (127)
5 ILLUMINA ss67484950 Nov 30, 2006 (127)
6 ILLUMINA ss67842723 Nov 30, 2006 (127)
7 PERLEGEN ss68756315 May 17, 2007 (127)
8 ILLUMINA ss70879687 May 25, 2008 (130)
9 ILLUMINA ss71470124 May 17, 2007 (127)
10 ILLUMINA ss75432018 Dec 06, 2007 (129)
11 ILLUMINA ss79229798 Dec 15, 2007 (130)
12 HGSV ss80223122 Dec 15, 2007 (130)
13 KRIBB_YJKIM ss84523873 Dec 15, 2007 (130)
14 HGSV ss85608960 Dec 15, 2007 (130)
15 HUMANGENOME_JCVI ss99179694 Feb 05, 2009 (130)
16 BGI ss102713565 Dec 01, 2009 (131)
17 1000GENOMES ss109940958 Jan 24, 2009 (130)
18 ILLUMINA-UK ss118440109 Feb 14, 2009 (130)
19 ILLUMINA ss122594142 Dec 01, 2009 (131)
20 ENSEMBL ss143322506 Dec 01, 2009 (131)
21 ILLUMINA ss154375346 Dec 01, 2009 (131)
22 GMI ss154527410 Dec 01, 2009 (131)
23 ILLUMINA ss159551240 Dec 01, 2009 (131)
24 ILLUMINA ss160798168 Dec 01, 2009 (131)
25 COMPLETE_GENOMICS ss163707170 Jul 04, 2010 (132)
26 ILLUMINA ss172171688 Jul 04, 2010 (132)
27 ILLUMINA ss174069607 Jul 04, 2010 (132)
28 BUSHMAN ss197888486 Jul 04, 2010 (132)
29 BCM-HGSC-SUB ss205368380 Jul 04, 2010 (132)
30 1000GENOMES ss218191780 Jul 14, 2010 (132)
31 1000GENOMES ss230396354 Jul 14, 2010 (132)
32 1000GENOMES ss238115909 Jul 15, 2010 (132)
33 GMI ss275682329 May 04, 2012 (137)
34 PJP ss290494309 May 09, 2011 (134)
35 ILLUMINA ss481317791 May 04, 2012 (137)
36 ILLUMINA ss481342949 May 04, 2012 (137)
37 ILLUMINA ss482324709 Sep 08, 2015 (146)
38 ILLUMINA ss485454046 May 04, 2012 (137)
39 ILLUMINA ss537378645 Sep 08, 2015 (146)
40 TISHKOFF ss553713247 Apr 25, 2013 (138)
41 SSMP ss647518253 Apr 25, 2013 (138)
42 ILLUMINA ss778947850 Sep 08, 2015 (146)
43 ILLUMINA ss783172491 Sep 08, 2015 (146)
44 ILLUMINA ss784127991 Sep 08, 2015 (146)
45 ILLUMINA ss825560316 Apr 01, 2015 (144)
46 ILLUMINA ss832432046 Sep 08, 2015 (146)
47 ILLUMINA ss833062413 Jul 12, 2019 (153)
48 ILLUMINA ss834409664 Sep 08, 2015 (146)
49 EVA-GONL ss974771802 Aug 21, 2014 (142)
50 JMKIDD_LAB ss1067613525 Aug 21, 2014 (142)
51 1000GENOMES ss1289349515 Aug 21, 2014 (142)
52 DDI ss1425685745 Apr 01, 2015 (144)
53 EVA_GENOME_DK ss1573851923 Apr 01, 2015 (144)
54 EVA_DECODE ss1584131719 Apr 01, 2015 (144)
55 EVA_UK10K_ALSPAC ss1599382182 Apr 01, 2015 (144)
56 EVA_UK10K_TWINSUK ss1642376215 Apr 01, 2015 (144)
57 EVA_SVP ss1712305541 Apr 01, 2015 (144)
58 ILLUMINA ss1751860199 Sep 08, 2015 (146)
59 HAMMER_LAB ss1793716608 Sep 08, 2015 (146)
60 WEILL_CORNELL_DGM ss1917963646 Feb 12, 2016 (147)
61 ILLUMINA ss1945981809 Feb 12, 2016 (147)
62 ILLUMINA ss1958230769 Feb 12, 2016 (147)
63 GENOMED ss1966667722 Jul 19, 2016 (147)
64 JJLAB ss2019499713 Sep 14, 2016 (149)
65 USC_VALOUEV ss2147486405 Dec 20, 2016 (150)
66 HUMAN_LONGEVITY ss2159384491 Dec 20, 2016 (150)
67 TOPMED ss2321523872 Dec 20, 2016 (150)
68 SYSTEMSBIOZJU ss2624265466 Nov 08, 2017 (151)
69 ILLUMINA ss2632465727 Nov 08, 2017 (151)
70 GRF ss2697377316 Nov 08, 2017 (151)
71 ILLUMINA ss2710663575 Nov 08, 2017 (151)
72 GNOMAD ss2750669486 Nov 08, 2017 (151)
73 AFFY ss2984841249 Nov 08, 2017 (151)
74 AFFY ss2985495005 Nov 08, 2017 (151)
75 SWEGEN ss2986154016 Nov 08, 2017 (151)
76 ILLUMINA ss3021043724 Nov 08, 2017 (151)
77 BIOINF_KMB_FNS_UNIBA ss3023514234 Nov 08, 2017 (151)
78 TOPMED ss3066466967 Nov 08, 2017 (151)
79 CSHL ss3343274110 Nov 08, 2017 (151)
80 ILLUMINA ss3625523508 Oct 11, 2018 (152)
81 ILLUMINA ss3626007067 Oct 11, 2018 (152)
82 ILLUMINA ss3630505772 Oct 11, 2018 (152)
83 ILLUMINA ss3632878061 Oct 11, 2018 (152)
84 ILLUMINA ss3633571481 Oct 11, 2018 (152)
85 ILLUMINA ss3634302067 Oct 11, 2018 (152)
86 ILLUMINA ss3635265684 Oct 11, 2018 (152)
87 ILLUMINA ss3635978714 Oct 11, 2018 (152)
88 ILLUMINA ss3637016024 Oct 11, 2018 (152)
89 ILLUMINA ss3637732494 Oct 11, 2018 (152)
90 ILLUMINA ss3638887865 Oct 11, 2018 (152)
91 ILLUMINA ss3639440637 Oct 11, 2018 (152)
92 ILLUMINA ss3640009433 Oct 11, 2018 (152)
93 ILLUMINA ss3640973169 Oct 11, 2018 (152)
94 ILLUMINA ss3641266984 Oct 11, 2018 (152)
95 ILLUMINA ss3642746769 Oct 11, 2018 (152)
96 ILLUMINA ss3644477672 Oct 11, 2018 (152)
97 URBANLAB ss3646581856 Oct 11, 2018 (152)
98 ILLUMINA ss3651365776 Oct 11, 2018 (152)
99 ILLUMINA ss3653615013 Oct 11, 2018 (152)
100 EGCUT_WGS ss3654265143 Jul 12, 2019 (153)
101 EVA_DECODE ss3685997586 Jul 12, 2019 (153)
102 ILLUMINA ss3724988458 Jul 12, 2019 (153)
103 ACPOP ss3726718514 Jul 12, 2019 (153)
104 ILLUMINA ss3744040778 Jul 12, 2019 (153)
105 ILLUMINA ss3744602998 Jul 12, 2019 (153)
106 EVA ss3745724063 Jul 12, 2019 (153)
107 PAGE_CC ss3770778830 Jul 12, 2019 (153)
108 ILLUMINA ss3772104756 Jul 12, 2019 (153)
109 KHV_HUMAN_GENOMES ss3798746665 Jul 12, 2019 (153)
110 EVA ss3825982509 Apr 25, 2020 (154)
111 HGDP ss3847322116 Apr 25, 2020 (154)
112 SGDP_PRJ ss3848003340 Apr 25, 2020 (154)
113 KRGDB ss3892845954 Apr 25, 2020 (154)
114 KOGIC ss3943635754 Apr 25, 2020 (154)
115 EVA ss3984450757 Apr 25, 2021 (155)
116 EVA ss3984774092 Apr 25, 2021 (155)
117 EVA ss4016889112 Apr 25, 2021 (155)
118 TOPMED ss4436514167 Apr 25, 2021 (155)
119 TOMMO_GENOMICS ss5142065844 Apr 25, 2021 (155)
120 1000Genomes NC_000001.10 - 1030565 Oct 11, 2018 (152)
121 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 1030565 Oct 11, 2018 (152)
122 Genetic variation in the Estonian population NC_000001.10 - 1030565 Oct 11, 2018 (152)
123 The Danish reference pan genome NC_000001.10 - 1030565 Apr 25, 2020 (154)
124 gnomAD - Genomes NC_000001.11 - 1095185 Apr 25, 2021 (155)
125 Genome of the Netherlands Release 5 NC_000001.10 - 1030565 Apr 25, 2020 (154)
126 HGDP-CEPH-db Supplement 1 NC_000001.9 - 1020428 Apr 25, 2020 (154)
127 HapMap NC_000001.11 - 1095185 Apr 25, 2020 (154)
128 KOREAN population from KRGDB NC_000001.10 - 1030565 Apr 25, 2020 (154)
129 Korean Genome Project NC_000001.11 - 1095185 Apr 25, 2020 (154)
130 Northern Sweden NC_000001.10 - 1030565 Jul 12, 2019 (153)
131 The PAGE Study NC_000001.11 - 1095185 Jul 12, 2019 (153)
132 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000001.10 - 1030565 Apr 25, 2021 (155)
133 CNV burdens in cranial meningiomas NC_000001.10 - 1030565 Apr 25, 2021 (155)
134 Qatari NC_000001.10 - 1030565 Apr 25, 2020 (154)
135 SGDP_PRJ NC_000001.10 - 1030565 Apr 25, 2020 (154)
136 Siberian NC_000001.10 - 1030565 Apr 25, 2020 (154)
137 8.3KJPN NC_000001.10 - 1030565 Apr 25, 2021 (155)
138 TopMed NC_000001.11 - 1095185 Apr 25, 2021 (155)
139 UK 10K study - Twins NC_000001.10 - 1030565 Oct 11, 2018 (152)
140 A Vietnamese Genetic Variation Database NC_000001.10 - 1030565 Jul 12, 2019 (153)
141 ALFA NC_000001.11 - 1095185 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs59250578 May 25, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss80223122, ss85608960, ss3638887865, ss3639440637 NC_000001.8:1070487:C:T NC_000001.11:1095184:C:T (self)
8, ss109940958, ss118440109, ss163707170, ss197888486, ss205368380, ss275682329, ss290494309, ss481317791, ss825560316, ss1584131719, ss1712305541, ss3642746769, ss3847322116 NC_000001.9:1020427:C:T NC_000001.11:1095184:C:T (self)
14617, 4537, 3391, 1359157, 2140, 23348, 3379, 19, 56, 5576, 20320, 2759, 35151, 4537, 1022, ss218191780, ss230396354, ss238115909, ss481342949, ss482324709, ss485454046, ss537378645, ss553713247, ss647518253, ss778947850, ss783172491, ss784127991, ss832432046, ss833062413, ss834409664, ss974771802, ss1067613525, ss1289349515, ss1425685745, ss1573851923, ss1599382182, ss1642376215, ss1751860199, ss1793716608, ss1917963646, ss1945981809, ss1958230769, ss1966667722, ss2019499713, ss2147486405, ss2321523872, ss2624265466, ss2632465727, ss2697377316, ss2710663575, ss2750669486, ss2984841249, ss2985495005, ss2986154016, ss3021043724, ss3343274110, ss3625523508, ss3626007067, ss3630505772, ss3632878061, ss3633571481, ss3634302067, ss3635265684, ss3635978714, ss3637016024, ss3637732494, ss3640009433, ss3640973169, ss3641266984, ss3644477672, ss3651365776, ss3653615013, ss3654265143, ss3726718514, ss3744040778, ss3744602998, ss3745724063, ss3772104756, ss3825982509, ss3848003340, ss3892845954, ss3984450757, ss3984774092, ss4016889112, ss5142065844 NC_000001.10:1030564:C:T NC_000001.11:1095184:C:T (self)
136110, 198, 13755, 299, 67688, 120502, 727349523, ss2159384491, ss3023514234, ss3066466967, ss3646581856, ss3685997586, ss3724988458, ss3770778830, ss3798746665, ss3943635754, ss4436514167 NC_000001.11:1095184:C:T NC_000001.11:1095184:C:T (self)
ss41187742, ss66623403, ss67484950, ss67842723, ss68756315, ss70879687, ss71470124, ss75432018, ss79229798, ss84523873, ss99179694, ss102713565, ss122594142, ss143322506, ss154375346, ss154527410, ss159551240, ss160798168, ss172171688, ss174069607 NT_004350.19:509196:C:T NC_000001.11:1095184:C:T (self)
ss15400814 NT_077913.2:34275:C:T NC_000001.11:1095184:C:T (self)
ss9872208 NT_077960.1:102050:C:T NC_000001.11:1095184:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs6687776
PMID Title Author Year Journal
20964851 CCRaVAT and QuTie-enabling analysis of rare variants in large-scale case control and quantitative trait association studies. Lawrence R et al. 2010 BMC bioinformatics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad