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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs725021

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr1:17626036 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.042185 (11166/264690, TOPMED)
C=0.006795 (1712/251940, ALFA)
C=0.009982 (2507/251142, GnomAD_exome) (+ 10 more)
C=0.041699 (5832/139858, GnomAD)
C=0.012027 (1459/121310, ExAC)
C=0.06378 (5017/78658, PAGE_STUDY)
C=0.04336 (564/13006, GO-ESP)
C=0.0449 (225/5008, 1000G)
C=0.0003 (1/3854, ALSPAC)
C=0.0000 (0/3708, TWINSUK)
C=0.1116 (142/1272, HapMap)
C=0.028 (6/216, Qatari)
A=0.31 (5/16, SGDP_PRJ)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ARHGEF10L : Synonymous Variant
Publications
0 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 1 NC_000001.11:g.17626036A>C
GRCh37.p13 chr 1 NC_000001.10:g.17952531A>C
ARHGEF10L RefSeqGene NG_050860.1:g.110840A>C
Gene: ARHGEF10L, Rho guanine nucleotide exchange factor 10 like (plus strand)
Molecule type Change Amino acid[Codon] SO Term
ARHGEF10L transcript variant 4 NM_001319838.1:c.535-1294…

NM_001319838.1:c.535-1294A>C

N/A Intron Variant
ARHGEF10L transcript variant 2 NM_001011722.2:c.1281A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform 2 NP_001011722.2:p.Ile427= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant 3 NM_001319837.1:c.1281A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform 3 NP_001306766.1:p.Ile427= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant 5 NM_001328124.1:c.732A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform 5 NP_001315053.1:p.Ile244= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant 1 NM_018125.4:c.1398A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform 1 NP_060595.3:p.Ile466= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant 6 NR_137287.2:n.1697A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant 7 NR_137288.2:n.1577A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X2 XM_005245923.2:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_005245980.2:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X1 XM_006710728.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_006710791.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X7 XM_006710729.1:c.1290A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X2 XP_006710792.1:p.Ile430= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X6 XM_006710731.1:c.1290A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X2 XP_006710794.1:p.Ile430= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X9 XM_005245925.2:c.1281A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X4 XP_005245982.2:p.Ile427= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X8 XM_011541691.2:c.1284A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X3 XP_011539993.1:p.Ile428= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X10 XM_011541692.2:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X5 XP_011539994.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X11 XM_011541693.2:c.1284A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X6 XP_011539995.1:p.Ile428= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X12 XM_017001617.1:c.1281A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X7 XP_016857106.1:p.Ile427= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X16 XM_017001618.1:c.687A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X9 XP_016857107.1:p.Ile229= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X17 XM_017001619.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X10 XP_016857108.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X18 XM_017001620.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X11 XP_016857109.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X26 XM_017001621.1:c.1398A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X12 XP_016857110.1:p.Ile466= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X27 XM_017001622.1:c.1398A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X13 XP_016857111.1:p.Ile466= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X3 XM_024448059.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303827.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X4 XM_024448061.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303829.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X5 XM_024448062.1:c.1293A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303830.1:p.Ile431= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X15 XM_005245929.3:c.732A>C I [ATA] > I [ATC] Coding Sequence Variant
rho guanine nucleotide exchange factor 10-like protein isoform X8 XP_005245986.2:p.Ile244= I (Ile) > I (Ile) Synonymous Variant
ARHGEF10L transcript variant X14 XR_001737276.1:n.1423A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X19 XR_001737277.1:n.1422A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X20 XR_946688.2:n.1422A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X21 XR_946689.2:n.1413A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X22 XR_946690.2:n.1423A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X24 XR_946691.2:n.1422A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X13 XR_946686.3:n.1422A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X23 XR_002956988.1:n.1422A>C N/A Non Coding Transcript Variant
ARHGEF10L transcript variant X25 XR_002956989.1:n.1422A>C N/A Non Coding Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 251940 A=0.993205 C=0.006795
European Sub 221240 A=0.999421 C=0.000579
African Sub 10842 A=0.86930 C=0.13070
African Others Sub 366 A=0.828 C=0.172
African American Sub 10476 A=0.87075 C=0.12925
Asian Sub 3754 A=0.9997 C=0.0003
East Asian Sub 3056 A=1.0000 C=0.0000
Other Asian Sub 698 A=0.999 C=0.001
Latin American 1 Sub 1186 A=0.9688 C=0.0312
Latin American 2 Sub 1284 A=0.9969 C=0.0031
South Asian Sub 360 A=1.000 C=0.000
Other Sub 13274 A=0.99058 C=0.00942


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.957815 C=0.042185
Allele Frequency Aggregator Total Global 251940 A=0.993205 C=0.006795
Allele Frequency Aggregator European Sub 221240 A=0.999421 C=0.000579
Allele Frequency Aggregator Other Sub 13274 A=0.99058 C=0.00942
Allele Frequency Aggregator African Sub 10842 A=0.86930 C=0.13070
Allele Frequency Aggregator Asian Sub 3754 A=0.9997 C=0.0003
Allele Frequency Aggregator Latin American 2 Sub 1284 A=0.9969 C=0.0031
Allele Frequency Aggregator Latin American 1 Sub 1186 A=0.9688 C=0.0312
Allele Frequency Aggregator South Asian Sub 360 A=1.000 C=0.000
gnomAD - Exomes Global Study-wide 251142 A=0.990018 C=0.009982
gnomAD - Exomes European Sub 135198 A=0.999615 C=0.000385
gnomAD - Exomes Asian Sub 49002 A=0.99992 C=0.00008
gnomAD - Exomes American Sub 34532 A=0.99395 C=0.00605
gnomAD - Exomes African Sub 16238 A=0.86396 C=0.13604
gnomAD - Exomes Ashkenazi Jewish Sub 10054 A=0.99871 C=0.00129
gnomAD - Exomes Other Sub 6118 A=0.9967 C=0.0033
gnomAD - Genomes Global Study-wide 139858 A=0.958301 C=0.041699
gnomAD - Genomes European Sub 75776 A=0.99949 C=0.00051
gnomAD - Genomes African Sub 41860 A=0.86710 C=0.13290
gnomAD - Genomes American Sub 13630 A=0.98775 C=0.01225
gnomAD - Genomes Ashkenazi Jewish Sub 3314 A=0.9994 C=0.0006
gnomAD - Genomes East Asian Sub 3130 A=1.0000 C=0.0000
gnomAD - Genomes Other Sub 2148 A=0.9716 C=0.0284
ExAC Global Study-wide 121310 A=0.987973 C=0.012027
ExAC Europe Sub 73284 A=0.99954 C=0.00046
ExAC Asian Sub 25148 A=0.99988 C=0.00012
ExAC American Sub 11574 A=0.99603 C=0.00397
ExAC African Sub 10396 A=0.86783 C=0.13217
ExAC Other Sub 908 A=0.998 C=0.002
The PAGE Study Global Study-wide 78658 A=0.93622 C=0.06378
The PAGE Study AfricanAmerican Sub 32496 A=0.86995 C=0.13005
The PAGE Study Mexican Sub 10802 A=0.99445 C=0.00555
The PAGE Study Asian Sub 8316 A=0.9996 C=0.0004
The PAGE Study PuertoRican Sub 7914 A=0.9673 C=0.0327
The PAGE Study NativeHawaiian Sub 4532 A=0.9980 C=0.0020
The PAGE Study Cuban Sub 4228 A=0.9742 C=0.0258
The PAGE Study Dominican Sub 3828 A=0.9368 C=0.0632
The PAGE Study CentralAmerican Sub 2448 A=0.9775 C=0.0225
The PAGE Study SouthAmerican Sub 1980 A=0.9899 C=0.0101
The PAGE Study NativeAmerican Sub 1258 A=0.9730 C=0.0270
The PAGE Study SouthAsian Sub 856 A=1.000 C=0.000
GO Exome Sequencing Project Global Study-wide 13006 A=0.95664 C=0.04336
GO Exome Sequencing Project European American Sub 8600 A=0.9997 C=0.0003
GO Exome Sequencing Project African American Sub 4406 A=0.8727 C=0.1273
1000Genomes Global Study-wide 5008 A=0.9551 C=0.0449
1000Genomes African Sub 1322 A=0.8336 C=0.1664
1000Genomes East Asian Sub 1008 A=1.0000 C=0.0000
1000Genomes Europe Sub 1006 A=0.9990 C=0.0010
1000Genomes South Asian Sub 978 A=1.000 C=0.000
1000Genomes American Sub 694 A=0.994 C=0.006
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.9997 C=0.0003
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=1.0000 C=0.0000
HapMap Global Study-wide 1272 A=0.8884 C=0.1116
HapMap African Sub 692 A=0.818 C=0.182
HapMap American Sub 316 A=0.953 C=0.047
HapMap Europe Sub 176 A=0.994 C=0.006
HapMap Asian Sub 88 A=1.00 C=0.00
Qatari Global Study-wide 216 A=0.972 C=0.028
SGDP_PRJ Global Study-wide 16 A=0.31 C=0.69
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C
GRCh38.p13 chr 1 NC_000001.11:g.17626036= NC_000001.11:g.17626036A>C
GRCh37.p13 chr 1 NC_000001.10:g.17952531= NC_000001.10:g.17952531A>C
ARHGEF10L RefSeqGene NG_050860.1:g.110840= NG_050860.1:g.110840A>C
ARHGEF10L transcript variant 1 NM_018125.4:c.1398= NM_018125.4:c.1398A>C
ARHGEF10L transcript variant 1 NM_018125.3:c.1398= NM_018125.3:c.1398A>C
ARHGEF10L transcript variant 6 NR_137287.2:n.1697= NR_137287.2:n.1697A>C
ARHGEF10L transcript variant 6 NR_137287.1:n.1560= NR_137287.1:n.1560A>C
ARHGEF10L transcript variant 7 NR_137288.2:n.1577= NR_137288.2:n.1577A>C
ARHGEF10L transcript variant 7 NR_137288.1:n.1440= NR_137288.1:n.1440A>C
ARHGEF10L transcript variant 2 NM_001011722.2:c.1281= NM_001011722.2:c.1281A>C
ARHGEF10L transcript variant 3 NM_001319837.1:c.1281= NM_001319837.1:c.1281A>C
ARHGEF10L transcript variant 5 NM_001328124.1:c.732= NM_001328124.1:c.732A>C
ARHGEF10L transcript variant X15 XM_005245929.3:c.732= XM_005245929.3:c.732A>C
ARHGEF10L transcript variant X9 XM_005245929.1:c.732= XM_005245929.1:c.732A>C
ARHGEF10L transcript variant X13 XR_946686.3:n.1422= XR_946686.3:n.1422A>C
ARHGEF10L transcript variant X2 XM_005245923.2:c.1293= XM_005245923.2:c.1293A>C
ARHGEF10L transcript variant X3 XM_005245923.1:c.1293= XM_005245923.1:c.1293A>C
ARHGEF10L transcript variant X8 XM_011541691.2:c.1284= XM_011541691.2:c.1284A>C
ARHGEF10L transcript variant X10 XM_011541692.2:c.1293= XM_011541692.2:c.1293A>C
ARHGEF10L transcript variant X9 XM_005245925.2:c.1281= XM_005245925.2:c.1281A>C
ARHGEF10L transcript variant X5 XM_005245925.1:c.1281= XM_005245925.1:c.1281A>C
ARHGEF10L transcript variant X11 XM_011541693.2:c.1284= XM_011541693.2:c.1284A>C
ARHGEF10L transcript variant X22 XR_946690.2:n.1423= XR_946690.2:n.1423A>C
ARHGEF10L transcript variant X20 XR_946688.2:n.1422= XR_946688.2:n.1422A>C
ARHGEF10L transcript variant X21 XR_946689.2:n.1413= XR_946689.2:n.1413A>C
ARHGEF10L transcript variant X24 XR_946691.2:n.1422= XR_946691.2:n.1422A>C
ARHGEF10L transcript variant X17 XM_017001619.1:c.1293= XM_017001619.1:c.1293A>C
ARHGEF10L transcript variant X18 XM_017001620.1:c.1293= XM_017001620.1:c.1293A>C
ARHGEF10L transcript variant X23 XR_002956988.1:n.1422= XR_002956988.1:n.1422A>C
ARHGEF10L transcript variant X25 XR_002956989.1:n.1422= XR_002956989.1:n.1422A>C
ARHGEF10L transcript variant X1 XM_006710728.1:c.1293= XM_006710728.1:c.1293A>C
ARHGEF10L transcript variant X6 XM_006710731.1:c.1290= XM_006710731.1:c.1290A>C
ARHGEF10L transcript variant X26 XM_017001621.1:c.1398= XM_017001621.1:c.1398A>C
ARHGEF10L transcript variant X27 XM_017001622.1:c.1398= XM_017001622.1:c.1398A>C
ARHGEF10L transcript variant X3 XM_024448059.1:c.1293= XM_024448059.1:c.1293A>C
ARHGEF10L transcript variant X4 XM_024448061.1:c.1293= XM_024448061.1:c.1293A>C
ARHGEF10L transcript variant X7 XM_006710729.1:c.1290= XM_006710729.1:c.1290A>C
ARHGEF10L transcript variant X12 XM_017001617.1:c.1281= XM_017001617.1:c.1281A>C
ARHGEF10L transcript variant X5 XM_024448062.1:c.1293= XM_024448062.1:c.1293A>C
ARHGEF10L transcript variant X19 XR_001737277.1:n.1422= XR_001737277.1:n.1422A>C
ARHGEF10L transcript variant X14 XR_001737276.1:n.1423= XR_001737276.1:n.1423A>C
ARHGEF10L transcript variant X16 XM_017001618.1:c.687= XM_017001618.1:c.687A>C
rho guanine nucleotide exchange factor 10-like protein isoform 1 NP_060595.3:p.Ile466= NP_060595.3:p.Ile466=
rho guanine nucleotide exchange factor 10-like protein isoform 2 NP_001011722.2:p.Ile427= NP_001011722.2:p.Ile427=
rho guanine nucleotide exchange factor 10-like protein isoform 3 NP_001306766.1:p.Ile427= NP_001306766.1:p.Ile427=
rho guanine nucleotide exchange factor 10-like protein isoform 5 NP_001315053.1:p.Ile244= NP_001315053.1:p.Ile244=
rho guanine nucleotide exchange factor 10-like protein isoform X8 XP_005245986.2:p.Ile244= XP_005245986.2:p.Ile244=
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_005245980.2:p.Ile431= XP_005245980.2:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X3 XP_011539993.1:p.Ile428= XP_011539993.1:p.Ile428=
rho guanine nucleotide exchange factor 10-like protein isoform X5 XP_011539994.1:p.Ile431= XP_011539994.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X4 XP_005245982.2:p.Ile427= XP_005245982.2:p.Ile427=
rho guanine nucleotide exchange factor 10-like protein isoform X6 XP_011539995.1:p.Ile428= XP_011539995.1:p.Ile428=
rho guanine nucleotide exchange factor 10-like protein isoform X10 XP_016857108.1:p.Ile431= XP_016857108.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X11 XP_016857109.1:p.Ile431= XP_016857109.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_006710791.1:p.Ile431= XP_006710791.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X2 XP_006710794.1:p.Ile430= XP_006710794.1:p.Ile430=
rho guanine nucleotide exchange factor 10-like protein isoform X12 XP_016857110.1:p.Ile466= XP_016857110.1:p.Ile466=
rho guanine nucleotide exchange factor 10-like protein isoform X13 XP_016857111.1:p.Ile466= XP_016857111.1:p.Ile466=
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303827.1:p.Ile431= XP_024303827.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303829.1:p.Ile431= XP_024303829.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X2 XP_006710792.1:p.Ile430= XP_006710792.1:p.Ile430=
rho guanine nucleotide exchange factor 10-like protein isoform X7 XP_016857106.1:p.Ile427= XP_016857106.1:p.Ile427=
rho guanine nucleotide exchange factor 10-like protein isoform X1 XP_024303830.1:p.Ile431= XP_024303830.1:p.Ile431=
rho guanine nucleotide exchange factor 10-like protein isoform X9 XP_016857107.1:p.Ile229= XP_016857107.1:p.Ile229=
ARHGEF10L transcript variant 4 NM_001319838.1:c.535-1294= NM_001319838.1:c.535-1294A>C
ARHGEF10L transcript variant X10 XM_005245930.1:c.535-1294= XM_005245930.1:c.535-1294A>C
Rho guanine nucleotide exchange factor (GEF) 10-like isoform X3 XP_005245980.1:p.Ile431= XP_005245980.1:p.Ile431=
Rho guanine nucleotide exchange factor (GEF) 10-like isoform X5 XP_005245982.1:p.Ile427= XP_005245982.1:p.Ile427=
Rho guanine nucleotide exchange factor (GEF) 10-like isoform X9 XP_005245986.1:p.Ile244= XP_005245986.1:p.Ile244=
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

81 SubSNP, 13 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss67888 Oct 05, 2000 (86)
2 SC_JCM ss6173222 Feb 20, 2003 (111)
3 ABI ss41132171 Mar 13, 2006 (126)
4 APPLERA_GI ss48415356 Mar 13, 2006 (126)
5 ILLUMINA ss75049834 Dec 06, 2007 (129)
6 KRIBB_YJKIM ss119364776 Dec 01, 2009 (131)
7 SEATTLESEQ ss159696407 Dec 01, 2009 (131)
8 ILLUMINA ss160865646 Dec 01, 2009 (131)
9 ILLUMINA ss174309637 Jul 04, 2010 (132)
10 BUSHMAN ss198097035 Jul 04, 2010 (132)
11 1000GENOMES ss210477118 Jul 14, 2010 (132)
12 1000GENOMES ss217405899 Jul 14, 2010 (132)
13 1000GENOMES ss217411025 Jul 14, 2010 (132)
14 1000GENOMES ss218260060 Jul 14, 2010 (132)
15 NHLBI-ESP ss341939214 May 09, 2011 (134)
16 ILLUMINA ss480913307 May 04, 2012 (137)
17 ILLUMINA ss481522988 May 04, 2012 (137)
18 ILLUMINA ss481551748 May 04, 2012 (137)
19 ILLUMINA ss482155969 May 04, 2012 (137)
20 ILLUMINA ss482526191 Sep 08, 2015 (146)
21 ILLUMINA ss485556528 May 04, 2012 (137)
22 1000GENOMES ss489724802 May 04, 2012 (137)
23 CLINSEQ_SNP ss491587174 May 04, 2012 (137)
24 ILLUMINA ss534020346 Sep 08, 2015 (146)
25 TISHKOFF ss553843920 Apr 25, 2013 (138)
26 ILLUMINA ss779091835 Sep 08, 2015 (146)
27 ILLUMINA ss781349830 Sep 08, 2015 (146)
28 ILLUMINA ss783223815 Sep 08, 2015 (146)
29 ILLUMINA ss832484109 Sep 08, 2015 (146)
30 ILLUMINA ss834555741 Sep 08, 2015 (146)
31 JMKIDD_LAB ss1067417143 Aug 21, 2014 (142)
32 JMKIDD_LAB ss1067702581 Aug 21, 2014 (142)
33 1000GENOMES ss1289866198 Aug 21, 2014 (142)
34 EVA_UK10K_ALSPAC ss1599636102 Apr 01, 2015 (144)
35 EVA_UK10K_TWINSUK ss1642630135 Apr 01, 2015 (144)
36 EVA_EXAC ss1685350929 Apr 01, 2015 (144)
37 ILLUMINA ss1751884160 Sep 08, 2015 (146)
38 WEILL_CORNELL_DGM ss1918112410 Feb 12, 2016 (147)
39 ILLUMINA ss1945986409 Feb 12, 2016 (147)
40 ILLUMINA ss1958247703 Feb 12, 2016 (147)
41 JJLAB ss2019567544 Sep 14, 2016 (149)
42 HUMAN_LONGEVITY ss2160379642 Dec 20, 2016 (150)
43 TOPMED ss2322560400 Dec 20, 2016 (150)
44 ILLUMINA ss2632483550 Nov 08, 2017 (151)
45 ILLUMINA ss2632483551 Nov 08, 2017 (151)
46 ILLUMINA ss2710666790 Nov 08, 2017 (151)
47 GNOMAD ss2731192190 Nov 08, 2017 (151)
48 GNOMAD ss2746239864 Nov 08, 2017 (151)
49 GNOMAD ss2752193161 Nov 08, 2017 (151)
50 SWEGEN ss2986396741 Nov 08, 2017 (151)
51 ILLUMINA ss3021060982 Nov 08, 2017 (151)
52 TOPMED ss3069849619 Nov 08, 2017 (151)
53 ILLUMINA ss3625527074 Oct 11, 2018 (152)
54 ILLUMINA ss3626037274 Oct 11, 2018 (152)
55 ILLUMINA ss3630521544 Oct 11, 2018 (152)
56 ILLUMINA ss3632882435 Oct 11, 2018 (152)
57 ILLUMINA ss3633576392 Oct 11, 2018 (152)
58 ILLUMINA ss3634309697 Oct 11, 2018 (152)
59 ILLUMINA ss3635270462 Oct 11, 2018 (152)
60 ILLUMINA ss3635985966 Oct 11, 2018 (152)
61 ILLUMINA ss3637020843 Oct 11, 2018 (152)
62 ILLUMINA ss3637740141 Oct 11, 2018 (152)
63 ILLUMINA ss3640017061 Oct 11, 2018 (152)
64 ILLUMINA ss3642753733 Oct 11, 2018 (152)
65 ILLUMINA ss3644482259 Oct 11, 2018 (152)
66 ILLUMINA ss3651385487 Oct 11, 2018 (152)
67 ILLUMINA ss3725001194 Jul 12, 2019 (153)
68 ILLUMINA ss3744042600 Jul 12, 2019 (153)
69 ILLUMINA ss3744610660 Jul 12, 2019 (153)
70 PAGE_CC ss3770789309 Jul 12, 2019 (153)
71 ILLUMINA ss3772112241 Jul 12, 2019 (153)
72 KHV_HUMAN_GENOMES ss3798907843 Jul 12, 2019 (153)
73 EVA ss3823569076 Apr 25, 2020 (154)
74 EVA ss3825555467 Apr 25, 2020 (154)
75 EVA ss3826047685 Apr 25, 2020 (154)
76 SGDP_PRJ ss3848316625 Apr 25, 2020 (154)
77 FSA-LAB ss3983919971 Apr 27, 2021 (155)
78 FSA-LAB ss3983919972 Apr 27, 2021 (155)
79 EVA ss3986103671 Apr 27, 2021 (155)
80 EVA ss4016895745 Apr 27, 2021 (155)
81 TOPMED ss4440707987 Apr 27, 2021 (155)
82 1000Genomes NC_000001.10 - 17952531 Oct 11, 2018 (152)
83 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 17952531 Oct 11, 2018 (152)
84 ExAC NC_000001.10 - 17952531 Oct 11, 2018 (152)
85 gnomAD - Genomes NC_000001.11 - 17626036 Apr 27, 2021 (155)
86 gnomAD - Exomes NC_000001.10 - 17952531 Jul 12, 2019 (153)
87 GO Exome Sequencing Project NC_000001.10 - 17952531 Oct 11, 2018 (152)
88 HapMap NC_000001.11 - 17626036 Apr 25, 2020 (154)
89 The PAGE Study NC_000001.11 - 17626036 Jul 12, 2019 (153)
90 Qatari NC_000001.10 - 17952531 Apr 25, 2020 (154)
91 SGDP_PRJ NC_000001.10 - 17952531 Apr 25, 2020 (154)
92 TopMed NC_000001.11 - 17626036 Apr 27, 2021 (155)
93 UK 10K study - Twins NC_000001.10 - 17952531 Oct 11, 2018 (152)
94 ALFA NC_000001.11 - 17626036 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss198097035, ss210477118, ss217405899, ss217411025, ss481522988, ss482155969, ss491587174, ss3642753733 NC_000001.9:17825117:A:C NC_000001.11:17626035:A:C (self)
548666, 283855, 4533504, 204760, 27794, 154340, 333605, 283855, ss218260060, ss341939214, ss480913307, ss481551748, ss482526191, ss485556528, ss489724802, ss534020346, ss553843920, ss779091835, ss781349830, ss783223815, ss832484109, ss834555741, ss1067417143, ss1067702581, ss1289866198, ss1599636102, ss1642630135, ss1685350929, ss1751884160, ss1918112410, ss1945986409, ss1958247703, ss2019567544, ss2322560400, ss2632483550, ss2632483551, ss2710666790, ss2731192190, ss2746239864, ss2752193161, ss2986396741, ss3021060982, ss3625527074, ss3626037274, ss3630521544, ss3632882435, ss3633576392, ss3634309697, ss3635270462, ss3635985966, ss3637020843, ss3637740141, ss3640017061, ss3644482259, ss3651385487, ss3744042600, ss3744610660, ss3772112241, ss3823569076, ss3825555467, ss3826047685, ss3848316625, ss3983919971, ss3983919972, ss3986103671, ss4016895745 NC_000001.10:17952530:A:C NC_000001.11:17626035:A:C (self)
3843113, 21420, 10778, 2708377, 4314322, 1012595259, ss2160379642, ss3069849619, ss3725001194, ss3770789309, ss3798907843, ss4440707987 NC_000001.11:17626035:A:C NC_000001.11:17626035:A:C (self)
ss67888, ss6173222, ss41132171, ss48415356, ss75049834, ss119364776, ss159696407, ss160865646, ss174309637 NT_004610.19:4632618:A:C NC_000001.11:17626035:A:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs725021

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad