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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs778593

Current Build 155

Released April 9, 2021

Organism
Homo sapiens
Position
chr5:140647631 (GRCh38.p13) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.371589 (98356/264690, TOPMED)
C=0.416773 (89502/214750, GnomAD_exome)
C=0.386656 (54186/140140, GnomAD) (+ 19 more)
C=0.47733 (37734/79052, ExAC)
C=0.40573 (22259/54862, ALFA)
C=0.49457 (8289/16760, 8.3KJPN)
C=0.36861 (4786/12984, GO-ESP)
C=0.3778 (1892/5008, 1000G)
C=0.4522 (2026/4480, Estonian)
C=0.4180 (1611/3854, ALSPAC)
C=0.4159 (1542/3708, TWINSUK)
C=0.4173 (1222/2928, KOREAN)
C=0.4334 (794/1832, Korea1K)
C=0.3899 (439/1126, Daghestan)
C=0.407 (406/998, GoNL)
C=0.448 (269/600, NorthernSweden)
C=0.307 (164/534, MGP)
T=0.323 (122/378, SGDP_PRJ)
C=0.296 (64/216, Qatari)
C=0.462 (98/212, Vietnamese)
C=0.20 (8/40, GENOME_DK)
T=0.37 (14/38, Siberian)
Clinical Significance
Reported in ClinVar
Gene : Consequence
IK : 2KB Upstream Variant
MIR3655 : 2KB Upstream Variant
NDUFA2 : 2KB Upstream Variant (+ 1 more)
TMCO6 : 500B Downstream Variant
Publications
0 citations
Genomic View
See rs on genome
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p13 chr 5 NC_000005.10:g.140647631T>C
GRCh37.p13 chr 5 NC_000005.9:g.140027216T>C
NDUFA2 RefSeqGene NG_021417.1:g.5155A>G
Gene: NDUFA2, NADH:ubiquinone oxidoreductase subunit A2 (minus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
NDUFA2 transcript variant 2 NM_001185012.2:c. N/A Upstream Transcript Variant
NDUFA2 transcript variant 1 NM_002488.5:c. N/A Upstream Transcript Variant
NDUFA2 transcript variant 3 NR_033697.2:n. N/A Upstream Transcript Variant
Gene: TMCO6, transmembrane and coiled-coil domains 6 (plus strand) : 500B Downstream Variant
Molecule type Change Amino acid[Codon] SO Term
TMCO6 transcript variant 1 NM_001300980.2:c. N/A N/A
TMCO6 transcript variant 3 NM_001300982.2:c. N/A N/A
TMCO6 transcript variant 2 NM_018502.5:c. N/A N/A
TMCO6 transcript variant X4 XM_011537663.2:c. N/A Downstream Transcript Variant
TMCO6 transcript variant X1 XM_005268477.1:c. N/A N/A
TMCO6 transcript variant X7 XM_011537665.2:c. N/A N/A
TMCO6 transcript variant X8 XM_011537668.2:c. N/A N/A
TMCO6 transcript variant X2 XM_017009617.2:c. N/A N/A
TMCO6 transcript variant X3 XM_017009618.1:c. N/A N/A
TMCO6 transcript variant X6 XM_017009619.1:c. N/A N/A
TMCO6 transcript variant X10 XM_017009620.1:c. N/A N/A
TMCO6 transcript variant X5 XM_024446124.1:c. N/A N/A
TMCO6 transcript variant X9 XM_024446125.1:c. N/A N/A
TMCO6 transcript variant X11 XM_024446126.1:c. N/A N/A
Gene: IK, IK cytokine (plus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
IK transcript NM_006083.4:c. N/A Upstream Transcript Variant
IK transcript variant X1 XR_002956156.1:n. N/A Upstream Transcript Variant
Gene: MIR3655, microRNA 3655 (plus strand) : 2KB Upstream Variant
Molecule type Change Amino acid[Codon] SO Term
MIR3655 transcript NR_037428.1:n. N/A Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: C (allele ID: 295653 )
ClinVar Accession Disease Names Clinical Significance
RCV000355665.2 Mitochondrial complex I deficiency, nuclear type 1 Benign

ALFA Allele Frequency (New)
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20201027095038
Population Group Sample Size Ref Allele Alt Allele
Total Global 54862 T=0.59427 C=0.40573
European Sub 38146 T=0.58030 C=0.41970
African Sub 4214 T=0.6879 C=0.3121
African Others Sub 152 T=0.717 C=0.283
African American Sub 4062 T=0.6869 C=0.3131
Asian Sub 214 T=0.556 C=0.444
East Asian Sub 148 T=0.588 C=0.412
Other Asian Sub 66 T=0.48 C=0.52
Latin American 1 Sub 326 T=0.647 C=0.353
Latin American 2 Sub 5278 T=0.6239 C=0.3761
South Asian Sub 152 T=0.566 C=0.434
Other Sub 6532 T=0.5908 C=0.4092


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.628411 C=0.371589
gnomAD - Exomes Global Study-wide 214750 T=0.583227 C=0.416773
gnomAD - Exomes European Sub 110876 T=0.564820 C=0.435180
gnomAD - Exomes Asian Sub 44840 T=0.57328 C=0.42672
gnomAD - Exomes American Sub 31586 T=0.61511 C=0.38489
gnomAD - Exomes African Sub 12520 T=0.71134 C=0.28866
gnomAD - Exomes Ashkenazi Jewish Sub 9394 T=0.5752 C=0.4248
gnomAD - Exomes Other Sub 5534 T=0.5744 C=0.4256
gnomAD - Genomes Global Study-wide 140140 T=0.613344 C=0.386656
gnomAD - Genomes European Sub 75896 T=0.56815 C=0.43185
gnomAD - Genomes African Sub 42000 T=0.70693 C=0.29307
gnomAD - Genomes American Sub 13646 T=0.60516 C=0.39484
gnomAD - Genomes Ashkenazi Jewish Sub 3320 T=0.5654 C=0.4346
gnomAD - Genomes East Asian Sub 3126 T=0.5448 C=0.4552
gnomAD - Genomes Other Sub 2152 T=0.6064 C=0.3936
ExAC Global Study-wide 79052 T=0.52267 C=0.47733
ExAC Europe Sub 47018 T=0.50096 C=0.49904
ExAC Asian Sub 19038 T=0.53782 C=0.46218
ExAC American Sub 6868 T=0.5368 C=0.4632
ExAC African Sub 5530 T=0.6365 C=0.3635
ExAC Other Sub 598 T=0.532 C=0.468
8.3KJPN JAPANESE Study-wide 16760 T=0.50543 C=0.49457
GO Exome Sequencing Project Global Study-wide 12984 T=0.63139 C=0.36861
GO Exome Sequencing Project European American Sub 8592 T=0.5888 C=0.4112
GO Exome Sequencing Project African American Sub 4392 T=0.7147 C=0.2853
1000Genomes Global Study-wide 5008 T=0.6222 C=0.3778
1000Genomes African Sub 1322 T=0.7269 C=0.2731
1000Genomes East Asian Sub 1008 T=0.5506 C=0.4494
1000Genomes Europe Sub 1006 T=0.5964 C=0.4036
1000Genomes South Asian Sub 978 T=0.550 C=0.450
1000Genomes American Sub 694 T=0.666 C=0.334
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.5478 C=0.4522
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.5820 C=0.4180
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.5841 C=0.4159
KOREAN population from KRGDB KOREAN Study-wide 2928 T=0.5827 C=0.4173
Korean Genome Project KOREAN Study-wide 1832 T=0.5666 C=0.4334
Genome-wide autozygosity in Daghestan Global Study-wide 1126 T=0.6101 C=0.3899
Genome-wide autozygosity in Daghestan Daghestan Sub 628 T=0.642 C=0.358
Genome-wide autozygosity in Daghestan Near_East Sub 142 T=0.535 C=0.465
Genome-wide autozygosity in Daghestan Central Asia Sub 118 T=0.576 C=0.424
Genome-wide autozygosity in Daghestan Europe Sub 104 T=0.558 C=0.442
Genome-wide autozygosity in Daghestan South Asian Sub 98 T=0.50 C=0.50
Genome-wide autozygosity in Daghestan Caucasus Sub 36 T=0.92 C=0.08
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.593 C=0.407
Northern Sweden ACPOP Study-wide 600 T=0.552 C=0.448
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 T=0.693 C=0.307
SGDP_PRJ Global Study-wide 378 T=0.323 C=0.677
Qatari Global Study-wide 216 T=0.704 C=0.296
A Vietnamese Genetic Variation Database Global Study-wide 212 T=0.538 C=0.462
The Danish reference pan genome Danish Study-wide 40 T=0.80 C=0.20
Siberian Global Study-wide 38 T=0.37 C=0.63
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= C
GRCh38.p13 chr 5 NC_000005.10:g.140647631= NC_000005.10:g.140647631T>C
GRCh37.p13 chr 5 NC_000005.9:g.140027216= NC_000005.9:g.140027216T>C
NDUFA2 RefSeqGene NG_021417.1:g.5155= NG_021417.1:g.5155A>G
NDUFA2 transcript variant 1 NM_002488.4:c.-48= NM_002488.4:c.-48A>G
NDUFA2 transcript variant 3 NR_033697.1:n.155= NR_033697.1:n.155A>G
NDUFA2 transcript variant 2 NM_001185012.1:c.-48= NM_001185012.1:c.-48A>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

91 SubSNP, 22 Frequency, 1 ClinVar submissions
No Submitter Submission ID Date (Build)
1 KWOK ss910341 Oct 05, 2000 (86)
2 SC_JCM ss3607514 Sep 28, 2001 (100)
3 RIKENSNPRC ss5601034 Dec 12, 2002 (110)
4 PERLEGEN ss24145263 Sep 20, 2004 (123)
5 KYUGEN ss28461090 Sep 20, 2004 (123)
6 HGSV ss82868785 Dec 14, 2007 (130)
7 BCMHGSC_JDW ss93269062 Mar 24, 2008 (129)
8 1000GENOMES ss109460579 Jan 24, 2009 (130)
9 ILLUMINA-UK ss116832912 Feb 14, 2009 (130)
10 ENSEMBL ss143483898 Dec 01, 2009 (131)
11 ILLUMINA ss152536454 Dec 01, 2009 (131)
12 GMI ss156093900 Dec 01, 2009 (131)
13 ILLUMINA ss159102642 Dec 01, 2009 (131)
14 ILLUMINA ss159846004 Dec 01, 2009 (131)
15 COMPLETE_GENOMICS ss162714014 Jul 04, 2010 (132)
16 COMPLETE_GENOMICS ss167145375 Jul 04, 2010 (132)
17 ILLUMINA ss168871039 Jul 04, 2010 (132)
18 ILLUMINA ss169036212 Jul 04, 2010 (132)
19 BUSHMAN ss200936896 Jul 04, 2010 (132)
20 BCM-HGSC-SUB ss206970441 Jul 04, 2010 (132)
21 1000GENOMES ss221997040 Jul 14, 2010 (132)
22 1000GENOMES ss233170976 Jul 14, 2010 (132)
23 1000GENOMES ss240287691 Jul 15, 2010 (132)
24 BL ss253846289 May 09, 2011 (134)
25 GMI ss278502537 May 04, 2012 (137)
26 PJP ss293471511 May 09, 2011 (134)
27 ILLUMINA ss479154449 Sep 08, 2015 (146)
28 ILLUMINA ss482942785 May 04, 2012 (137)
29 ILLUMINA ss484946039 May 04, 2012 (137)
30 1000GENOMES ss490911507 May 04, 2012 (137)
31 ILLUMINA ss534853504 Sep 08, 2015 (146)
32 TISHKOFF ss558749503 Apr 25, 2013 (138)
33 SSMP ss652649742 Apr 25, 2013 (138)
34 NHLBI-ESP ss712661668 Apr 25, 2013 (138)
35 ILLUMINA ss778675346 Aug 21, 2014 (142)
36 ILLUMINA ss781929075 Aug 21, 2014 (142)
37 ILLUMINA ss832615438 Jul 13, 2019 (153)
38 ILLUMINA ss834133802 Aug 21, 2014 (142)
39 EVA-GONL ss982186017 Aug 21, 2014 (142)
40 JMKIDD_LAB ss1073085608 Aug 21, 2014 (142)
41 1000GENOMES ss1317463763 Aug 21, 2014 (142)
42 HAMMER_LAB ss1397429125 Sep 08, 2015 (146)
43 EVA_GENOME_DK ss1581373581 Apr 01, 2015 (144)
44 EVA_DECODE ss1591715441 Apr 01, 2015 (144)
45 EVA_UK10K_ALSPAC ss1614144159 Apr 01, 2015 (144)
46 EVA_UK10K_TWINSUK ss1657138192 Apr 01, 2015 (144)
47 EVA_EXAC ss1687976840 Apr 01, 2015 (144)
48 EVA_MGP ss1711099242 Apr 01, 2015 (144)
49 HAMMER_LAB ss1804107049 Sep 08, 2015 (146)
50 WEILL_CORNELL_DGM ss1925441259 Feb 12, 2016 (147)
51 GENOMED ss1970220902 Jul 19, 2016 (147)
52 JJLAB ss2023326067 Sep 14, 2016 (149)
53 USC_VALOUEV ss2151484453 Dec 20, 2016 (150)
54 HUMAN_LONGEVITY ss2278679674 Dec 20, 2016 (150)
55 TOPMED ss2446990573 Dec 20, 2016 (150)
56 SYSTEMSBIOZJU ss2626150842 Nov 08, 2017 (151)
57 ILLUMINA ss2634346892 Nov 08, 2017 (151)
58 GRF ss2707049727 Nov 08, 2017 (151)
59 GNOMAD ss2735265008 Nov 08, 2017 (151)
60 GNOMAD ss2747462747 Nov 08, 2017 (151)
61 GNOMAD ss2831495512 Nov 08, 2017 (151)
62 SWEGEN ss2997891339 Nov 08, 2017 (151)
63 BIOINF_KMB_FNS_UNIBA ss3025445482 Nov 08, 2017 (151)
64 CSHL ss3346653644 Nov 08, 2017 (151)
65 TOPMED ss3480330353 Nov 08, 2017 (151)
66 ILLUMINA ss3629353860 Oct 12, 2018 (152)
67 ILLUMINA ss3632270540 Oct 12, 2018 (152)
68 ILLUMINA ss3636738046 Oct 12, 2018 (152)
69 ILLUMINA ss3638583904 Oct 12, 2018 (152)
70 ILLUMINA ss3638583905 Oct 12, 2018 (152)
71 OMUKHERJEE_ADBS ss3646325025 Oct 12, 2018 (152)
72 EGCUT_WGS ss3665807474 Jul 13, 2019 (153)
73 EVA_DECODE ss3715819912 Jul 13, 2019 (153)
74 ACPOP ss3732867905 Jul 13, 2019 (153)
75 EVA ss3764136236 Jul 13, 2019 (153)
76 KHV_HUMAN_GENOMES ss3807306458 Jul 13, 2019 (153)
77 EVA ss3824117213 Apr 26, 2020 (154)
78 EVA ss3825681207 Apr 26, 2020 (154)
79 EVA ss3829533074 Apr 26, 2020 (154)
80 EVA ss3838241109 Apr 26, 2020 (154)
81 EVA ss3843683908 Apr 26, 2020 (154)
82 SGDP_PRJ ss3863101160 Apr 26, 2020 (154)
83 KRGDB ss3909761693 Apr 26, 2020 (154)
84 KOGIC ss3957765118 Apr 26, 2020 (154)
85 FSA-LAB ss3984317257 Apr 26, 2021 (155)
86 FSA-LAB ss3984317258 Apr 26, 2021 (155)
87 EVA ss3986031639 Apr 26, 2021 (155)
88 EVA ss3986320848 Apr 26, 2021 (155)
89 TOPMED ss4680915078 Apr 26, 2021 (155)
90 TOMMO_GENOMICS ss5174424918 Apr 26, 2021 (155)
91 EVA ss5237187281 Apr 26, 2021 (155)
92 1000Genomes NC_000005.9 - 140027216 Oct 12, 2018 (152)
93 The Avon Longitudinal Study of Parents and Children NC_000005.9 - 140027216 Oct 12, 2018 (152)
94 Genome-wide autozygosity in Daghestan NC_000005.8 - 140007400 Apr 26, 2020 (154)
95 Genetic variation in the Estonian population NC_000005.9 - 140027216 Oct 12, 2018 (152)
96 ExAC NC_000005.9 - 140027216 Oct 12, 2018 (152)
97 The Danish reference pan genome NC_000005.9 - 140027216 Apr 26, 2020 (154)
98 gnomAD - Genomes NC_000005.10 - 140647631 Apr 26, 2021 (155)
99 gnomAD - Exomes NC_000005.9 - 140027216 Jul 13, 2019 (153)
100 GO Exome Sequencing Project NC_000005.9 - 140027216 Oct 12, 2018 (152)
101 Genome of the Netherlands Release 5 NC_000005.9 - 140027216 Apr 26, 2020 (154)
102 KOREAN population from KRGDB NC_000005.9 - 140027216 Apr 26, 2020 (154)
103 Korean Genome Project NC_000005.10 - 140647631 Apr 26, 2020 (154)
104 Medical Genome Project healthy controls from Spanish population NC_000005.9 - 140027216 Apr 26, 2020 (154)
105 Northern Sweden NC_000005.9 - 140027216 Jul 13, 2019 (153)
106 Qatari NC_000005.9 - 140027216 Apr 26, 2020 (154)
107 SGDP_PRJ NC_000005.9 - 140027216 Apr 26, 2020 (154)
108 Siberian NC_000005.9 - 140027216 Apr 26, 2020 (154)
109 8.3KJPN NC_000005.9 - 140027216 Apr 26, 2021 (155)
110 TopMed NC_000005.10 - 140647631 Apr 26, 2021 (155)
111 UK 10K study - Twins NC_000005.9 - 140027216 Oct 12, 2018 (152)
112 A Vietnamese Genetic Variation Database NC_000005.9 - 140027216 Jul 13, 2019 (153)
113 ALFA NC_000005.10 - 140647631 Apr 26, 2021 (155)
114 ClinVar RCV000355665.2 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs3088318 Jul 03, 2002 (106)
rs56910213 May 23, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
403962, ss82868785, ss93269062, ss109460579, ss116832912, ss162714014, ss167145375, ss200936896, ss206970441, ss253846289, ss278502537, ss293471511, ss484946039, ss1397429125, ss1591715441 NC_000005.8:140007399:T:C NC_000005.10:140647630:T:C (self)
29151062, 16216449, 11545722, 7982394, 7538520, 4389487, 575310, 7203228, 16939087, 215002, 6152770, 7483189, 15118140, 4000807, 32394225, 16216449, 3593854, ss221997040, ss233170976, ss240287691, ss479154449, ss482942785, ss490911507, ss534853504, ss558749503, ss652649742, ss712661668, ss778675346, ss781929075, ss832615438, ss834133802, ss982186017, ss1073085608, ss1317463763, ss1581373581, ss1614144159, ss1657138192, ss1687976840, ss1711099242, ss1804107049, ss1925441259, ss1970220902, ss2023326067, ss2151484453, ss2446990573, ss2626150842, ss2634346892, ss2707049727, ss2735265008, ss2747462747, ss2831495512, ss2997891339, ss3346653644, ss3629353860, ss3632270540, ss3636738046, ss3638583904, ss3638583905, ss3646325025, ss3665807474, ss3732867905, ss3764136236, ss3824117213, ss3825681207, ss3829533074, ss3838241109, ss3863101160, ss3909761693, ss3984317257, ss3984317258, ss3986031639, ss3986320848, ss5174424918 NC_000005.9:140027215:T:C NC_000005.10:140647630:T:C (self)
RCV000355665.2, 206223080, 14143119, 324094857, 518292635, 7126941408, ss2278679674, ss3025445482, ss3480330353, ss3715819912, ss3807306458, ss3843683908, ss3957765118, ss4680915078, ss5237187281 NC_000005.10:140647630:T:C NC_000005.10:140647630:T:C (self)
ss910341, ss3607514, ss5601034, ss24145263, ss28461090, ss143483898, ss152536454, ss156093900, ss159102642, ss159846004, ss168871039, ss169036212 NT_029289.11:1190142:T:C NC_000005.10:140647630:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs778593

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post596+ae089ad