Targeted sequencing of Desmodium nicaraguense - SRA

SRX22404566: Targeted sequencing of Desmodium nicaraguense
1 ILLUMINA (Illumina HiSeq 3000) run: 758,956 spots, 227.7M bases, 85.3Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://0-doi-org.brum.beds.ac.uk/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://0-doi-org.brum.beds.ac.uk/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Desmodium nicaraguense

SAMN37561396 • SRS19441243 • All experiments • All runs

Organism: Desmodium nicaraguense

Library:

Name: ca34837a-13f7-4910-8f1f-e588b041fba6

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 758,956 spots, 227.7M bases, 85.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR26705011	758,956	227.7M	85.3Mb	2023-11-07

ID:: 30387034

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