Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX337812: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 607,101 spots, 183.3M bases, 110.4Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Foodborne Pathgen Survey

PRJNA167391 • SRP029099 • All experiments • All runs

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Genome sequencing project

Sample: Pathogen bacterial, environmental sample from Salmonella enterica subsp. enterica Serovar Bredeney str. CFSAN001080

SAMN01813431 • SRS472217 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080

Library:

Name: Salmonella enterica str. CFSAN001080_01 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Bredeney str. CFSAN001080.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.17.28

Runs: 1 run, 607,101 spots, 183.3M bases, 110.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR955256	607,101	183.3M	110.4Mb	2013-09-03

ID:: 475275

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