U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX4649014: HiSeq of endosymbiont Buchnera aphidicola from Macrosiphoniella sanborni
1 ILLUMINA (Illumina HiSeq 4000) run: 11.1M spots, 3.3G bases, 1.5Gb downloads

Design: Shotgun sequencing of whole aphids, Macrosiphoniella sanborni
Submitted by: University of Hawaii
Study: Genome sequencing and assembly of Buchnera aphidicola
show Abstracthide Abstract
Symbiotic interaction between hosts and microbes promotes the establishment of new ecological niches and has profound impacts on the evolutionary trajectory of eukaryotic lineages. Many insects harbor maternally transmitted endosymbionts that provision hosts with key nutrients. One key evolutionary consequence of vertically transmitted symbiosis is rapid degradation of symbiont genomes. We use the system of aphids and their obligate endosymbionts, Buchnera aphidicola, to explore the evolutionary process of symbiont genome degradation and the functional consequences of this process.
Sample: Buchnera_aphidicola_str._Msa
SAMN09980515 • SRS3747031 • All experiments • All runs
Library:
Name: Msa
Instrument: Illumina HiSeq 4000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 11.1M spots, 3.3G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
SRR779659411,079,7573.3G1.5Gb2019-04-30

ID:
6279319

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...