Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

SRX799409: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002066 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 461,897 spots, 200.9M bases, 142.9Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)

Study: Foodborne Pathogen Survey

PRJNA191772 • SRP050917 • All experiments • All runs

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Genome Sequencing Project

Sample: Clinical or host-associated pathogen sample from Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002066

SAMN01933204 • SRS782530 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002066

Library:

Name: Salmonella enterica str. CFSAN002066 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002066.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.54

Runs: 1 run, 461,897 spots, 200.9M bases, 142.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1696766	461,897	200.9M	142.9Mb	2014-12-08

ID:: 1142985

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