Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX369227: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-281220' containing sample 'Staphylococcus aureus M1580'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.6M spots, 1.3G bases, 797.8Mb downloads

UUID: 4c9cff2c-a94b-42c9-9028-3b8d3bc40fb1

Design: Illumina sequencing of Staphylococcus aureus M1580 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217740 • SRP032318 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1580

SAMN02339955 • SRS494767 • All experiments • All runs

Organism: Staphylococcus aureus M1580

Library:

Name: Pond-281220

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 407747.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WBKT

material_type: DNA:DNA Somatic

product_order: PDO-1981

product_part_number: P-WG-0004

project: G47200

research_project: RP-433

root_sample_id: SM-4CVD5

sample_id: SM-4WBKT

work_request: 38326

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-20 17:11:43.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.6M spots, 1.3G bases, 797.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1019852	6,580,475	1.3G	797.8Mb	2013-10-28

ID:: 527909

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