Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX360777: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-230591' containing sample 'ORNL_W42_C08'
7 ILLUMINA (Illumina HiSeq 2000) runs: 22M spots, 4.4G bases, 2.7Gb downloads

UUID: 1fa221b7-35a7-44e1-8550-2c88c7cc2bda

Design: Illumina sequencing of Subdoligranulum sp. ORNL_6EZ5-Gt_4_Pl1-34 via random selection

Submitted by: Broad Institute (BI)

Study: HMP reference genome

PRJNA197086 • SRP030608 • All experiments • All runs

Sample: Generic sample from Subdoligranulum sp. ORNL_6EZ5-Gt_4_Pl1-34

SAMN00699760 • SRS255866 • All experiments • All runs

Organism: Subdoligranulum sp. ORNL_6EZ5-Gt_4_Pl1-34

Library:

Name: Pond-230591

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 302675.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:41WN1

material_type: DNA:DNA Somatic

product_order: PDO-526

product_part_number: P-WG-0004

project: G32671

research_project: RP-129

root_sample_id: SM-3RC8F

sample_id: SM-41WN1

work_request: 35919

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-05-08 19:07:00.0	GAPipeline	RTA1.15.19.5	Sequencer Application 1.6.8.6

Runs: 7 runs, 22M spots, 4.4G bases, 2.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR1004193	3,156,811	637.7M	394.4Mb	2013-09-27
SRR1004194	3,122,199	630.7M	389.4Mb	2013-09-27
SRR1004195	3,144,755	635.2M	393.8Mb	2013-09-27
SRR1004196	3,145,772	635.4M	393.2Mb	2013-09-27
SRR1004197	3,139,803	634.2M	392.5Mb	2013-09-27
SRR1004198	3,121,178	630.5M	389.4Mb	2013-09-27
SRR1004199	3,196,278	645.6M	399.5Mb	2013-09-27

ID:: 509983

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