Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX392306: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-287626' containing sample 'Staphylococcus aureus OCMM6114'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.1M spots, 635.3M bases, 301Mb downloads

UUID: d4165707-95be-4025-acdf-6d724ce53314

Design: Illumina sequencing of Staphylococcus aureus OCMM6114 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Orange County

PRJNA224006 • SRP034347 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus OCMM6114

SAMN02381745 • SRS515452 • All experiments • All runs

Organism: Staphylococcus aureus OCMM6114

Library:

Name: Pond-287626

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 419468.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4YVZ1

material_type: DNA:DNA Somatic

product_order: PDO-2265

product_part_number: P-WG-0004

project: G49957

research_project: RP-493

root_sample_id: SM-4T2MA

sample_id: SM-4YVZ1

work_request: 38774

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-11-18 11:59:18.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.1M spots, 635.3M bases, 301Mb

Run	# of Spots	# of Bases	Size	Published
SRR1050295	1,545,472	312.2M	151.7Mb	2013-12-15
SRR1050296	1,599,491	323.1M	149.3Mb	2013-12-15

ID:: 563153

SRA

Sequence Read Archive

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