Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX392944: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-201544' containing sample 'M9D4' from individual 'Balbc Uninfected Mouse 4 Day 4'
1 ILLUMINA (Illumina MiSeq) run: 73,316 spots, 25.7M bases, 17.2Mb downloads

UUID: 739a7e73-3bd6-4ade-b07c-ed816eba6b41

Design: Illumina sequencing of Mycobacterium tuberculosis M9D4 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample: Generic sample from Mycobacterium tuberculosis M9D4

SAMN02391047 • SRS515901 • All experiments • All runs

Organism: Mycobacterium tuberculosis M9D4

Library:

Name: Solexa-201544

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 440791.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:55V8G

material_type: DNA:DNA Somatic

product_order: PDO-2385

product_part_number: P-MCV-0002

project: G51566

research_project: RP-114

root_sample_id: SM-4PMAY

sample_id: SM-55V8G

work_request: 39230

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-12-07 19:10:56.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 73,316 spots, 25.7M bases, 17.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1051149	73,316	25.7M	17.2Mb	2013-12-16

ID:: 566992

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