Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX463701: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-316262' containing sample 'Staphylococcus aureus W89268'
2 ILLUMINA (Illumina HiSeq 2000) runs: 5.1M spots, 1G bases, 513.9Mb downloads

UUID: a1ec300c-66b9-4a34-9480-23273b753d3c

Design: Illumina sequencing of Staphylococcus aureus W89268 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA CLEAR

PRJNA226977 • SRP036551 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus W89268

SAMN02398915 • SRS552364 • All experiments • All runs

Organism: Staphylococcus aureus W89268

Library:

Name: Pond-316262

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 463542.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5BC8S

material_type: DNA:DNA Somatic

product_order: PDO-2426

product_part_number: P-WG-0004

project: G52182

research_project: RP-509

root_sample_id: SM-4T66M

sample_id: SM-5BC8S

work_request: 39164

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-27 21:23:52.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 5.1M spots, 1G bases, 513.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159932	2,556,358	516.4M	258.4Mb	2014-02-04
SRR1163220	2,525,071	510.1M	255.5Mb	2014-02-06

ID:: 643869

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity