Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567375: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318714' containing sample 'VET0271R'
4 ILLUMINA (Illumina HiSeq 2000) runs: 17.4M spots, 3.5G bases, 1.7Gb downloads

UUID: 9f7828a0-c947-4054-8641-092c54a9f023

Design: Illumina sequencing of Staphylococcus aureus VET0271R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228636 • SRP042820 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0271R

SAMN02404128 • SRS626888 • All experiments • All runs

Organism: Staphylococcus aureus VET0271R

Library:

Name: Pond-318714

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471475.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CLEI

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55358

research_project: RP-513

root_sample_id: SM-4Q5P4

sample_id: SM-5CLEI

work_request: 39368

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 4 runs, 17.4M spots, 3.5G bases, 1.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR1329244	4,396,817	888.2M	443.4Mb	2014-06-03
SRR1342320	4,359,170	880.6M	441.1Mb	2014-06-05
SRR1342353	4,335,517	875.8M	437.7Mb	2014-06-05
SRR1344689	4,357,026	880.1M	443.5Mb	2014-06-06

ID:: 810192

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Sequence Read Archive

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