Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX548067: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-318364' containing sample 'VET0387R'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.1M spots, 830.1M bases, 384.8Mb downloads

UUID: 5aa85bdc-620e-4253-a2e9-06d593d0756c

Design: Illumina sequencing of Staphylococcus aureus VET0387R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228715 • SRP045024 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET0387R

SAMN02404205 • SRS616324 • All experiments • All runs

Organism: Staphylococcus aureus VET0387R

Library:

Name: Pond-318364

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470093.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5C8SP

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55145

research_project: RP-513

root_sample_id: SM-4PMV6

sample_id: SM-5C8SP

work_request: 39366

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:23.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.1M spots, 830.1M bases, 384.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1293411	2,050,136	414.1M	192.1Mb	2014-05-21
SRR1531010	2,059,191	416M	192.7Mb	2014-07-28

ID:: 785025

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity