Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX567853: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319767' containing sample 'VET1905R' from individual 'VET0212'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 764.3M bases, 343.4Mb downloads

UUID: 5a6a4c68-c6f3-4bff-b593-ff3eb9882cc1

Design: Illumina sequencing of Staphylococcus aureus VET1905R via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228834 • SRP042898 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1905R

SAMN02404324 • SRS627007 • All experiments • All runs

Organism: Staphylococcus aureus VET1905R

Library:

Name: Pond-319767

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470821.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDHB

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55247

research_project: RP-513

root_sample_id: SM-4PO9I

sample_id: SM-5CDHB

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 764.3M bases, 343.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1330222	1,911,030	386M	173.2Mb	2014-06-03
SRR1330259	1,872,472	378.2M	170.3Mb	2014-06-04

ID:: 810670

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