Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX566791: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319718' containing sample 'VET1024S'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.7M spots, 955.1M bases, 465.7Mb downloads

UUID: 37ad0630-2632-4ced-b3c1-079c5d671253

Design: Illumina sequencing of Staphylococcus aureus VET1024S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228862 • SRP042737 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1024S

SAMN02404352 • SRS626666 • All experiments • All runs

Organism: Staphylococcus aureus VET1024S

Library:

Name: Pond-319718

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 470772.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CDFW

material_type: DNA:DNA Somatic

product_order: PDO-2557

product_part_number: P-WG-0004

project: G55268

research_project: RP-513

root_sample_id: SM-4POAC

sample_id: SM-5CDFW

work_request: 39367

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-01 14:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.7M spots, 955.1M bases, 465.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1328182	2,389,393	482.7M	235Mb	2014-06-03
SRR1342287	2,338,960	472.5M	230.7Mb	2014-06-05

ID:: 809608

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