Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX555820: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319972' containing sample 'VET1373S' from individual 'VET0241'
1 ILLUMINA (Illumina HiSeq 2000) run: 6.9M spots, 1.4G bases, 691.8Mb downloads

UUID: 39bc7d94-da90-4e78-ad51-36c3d35992b4

Design: Illumina sequencing of Staphylococcus aureus VET1373S via random selection

Submitted by: Broad Institute (BI)

Study: MRSA ST398

PRJNA228878 • SRP042533 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus VET1373S

SAMN02404368 • SRS622903 • All experiments • All runs

Organism: Staphylococcus aureus VET1373S

Library:

Name: Pond-319972

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 473562.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CVKL

material_type: DNA:DNA Somatic

product_order: PDO-2556

product_part_number: P-WG-0004

project: G55003

research_project: RP-513

root_sample_id: SM-4Q554

sample_id: SM-5CVKL

work_request: 39345

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-06 12:52:38.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 6.9M spots, 1.4G bases, 691.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR1303531	6,878,505	1.4G	691.8Mb	2014-05-30

ID:: 794848

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