Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450733: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213003' containing sample 'M17D28' from individual 'Black6 Uninfected Mouse 2 Day 28'
1 ILLUMINA (Illumina MiSeq) run: 87,136 spots, 30.5M bases, 16.3Mb downloads

UUID: 40c28cbe-ebc0-4ccf-9d52-7d8d7e1645b9

Design: Illumina sequencing of Mycobacterium tuberculosis M17D28 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02580583 • SRS544122 • All experiments • All runs

Organism: Mycobacterium tuberculosis M17D28

Library:

Name: Solexa-213003

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 467756.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C1U5

material_type: DNA:DNA Somatic

product_order: PDO-2661

product_part_number: P-WG-0004

project: G56517

research_project: RP-548

root_sample_id: SM-4QNX3

sample_id: SM-5C1U5

work_request: 39974

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 87,136 spots, 30.5M bases, 16.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145550	87,136	30.5M	16.3Mb	2014-01-27

ID:: 629681

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