Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450857: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-212965' containing sample 'M2D4' from individual 'Balbc TB Infected Mouse 2 Day 4'
1 ILLUMINA (Illumina MiSeq) run: 80,858 spots, 28.3M bases, 15.7Mb downloads

UUID: 9873e5e1-f906-468d-9423-ee94bc1d5c59

Design: Illumina sequencing of Mycobacterium tuberculosis M2D4 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02580545 • SRS544247 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2D4

Library:

Name: Solexa-212965

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 467718.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C1T2

material_type: DNA:DNA Somatic

product_order: PDO-2661

product_part_number: P-WG-0004

project: G56479

research_project: RP-548

root_sample_id: SM-4QNVZ

sample_id: SM-5C1T2

work_request: 39974

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 80,858 spots, 28.3M bases, 15.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145683	80,858	28.3M	15.7Mb	2014-01-28

ID:: 629805

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