Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450782: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213025' containing sample 'M32D10pre' from individual 'MyD88 TB Infected Mouse 2 Day -10pre'
1 ILLUMINA (Illumina MiSeq) run: 51,862 spots, 18.2M bases, 9.9Mb downloads

UUID: c2449d18-e552-4830-ab14-5bd7aed3357c

Design: Illumina sequencing of Mycobacterium tuberculosis M32D10pre via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02580605 • SRS544171 • All experiments • All runs

Organism: Mycobacterium tuberculosis M32D10pre

Library:

Name: Solexa-213025

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 467778.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C1UR

material_type: DNA:DNA Somatic

product_order: PDO-2661

product_part_number: P-WG-0004

project: G56539

research_project: RP-548

root_sample_id: SM-4QNXP

sample_id: SM-5C1UR

work_request: 39974

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 51,862 spots, 18.2M bases, 9.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145599	51,862	18.2M	9.9Mb	2014-01-27

ID:: 629730

SRA

Sequence Read Archive

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