Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX475080: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319830' containing sample 'ABC020020531'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.1M spots, 619.3M bases, 290.3Mb downloads

UUID: 106308b2-a477-42c6-87ed-c9f6d72a5dc7

Design: Illumina sequencing of Streptococcus pyogenes ABC020020531 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA233239 • SRP038796 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020020531

SAMN02567588 • SRS560869 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020020531

Library:

Name: Pond-319830

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471684.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMY4

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56819

research_project: RP-560

root_sample_id: SM-4PMT3

sample_id: SM-5CMY4

work_request: 39853

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-19 09:03:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.1M spots, 619.3M bases, 290.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1174940	3,065,832	619.3M	290.3Mb	2014-02-24

ID:: 655570

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity