Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX462963: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319272' containing sample 'ABC020039009'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.4M spots, 693.2M bases, 352.5Mb downloads

UUID: 998c8d59-da35-4766-bb76-30291aff7961

Design: Illumina sequencing of Streptococcus pyogenes ABC020039009 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA232985 • SRP036281 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020039009

SAMN02567334 • SRS551744 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020039009

Library:

Name: Pond-319272

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471607.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMVW

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56802

research_project: RP-560

root_sample_id: SM-4P3LV

sample_id: SM-5CMVW

work_request: 39852

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.4M spots, 693.2M bases, 352.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159000	3,431,787	693.2M	352.5Mb	2014-02-04

ID:: 643131

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