Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX463055: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-319321' containing sample 'ABC020049299'
1 ILLUMINA (Illumina HiSeq 2000) run: 3.4M spots, 682.6M bases, 344.2Mb downloads

UUID: a2a18d3e-0991-4ea1-8605-07198fedec19

Design: Illumina sequencing of Streptococcus pyogenes ABC020049299 via random selection

Submitted by: Broad Institute (BI)

Study: Group A Streptococcus

PRJNA233178 • SRP036345 • All experiments • All runs

Sample: Generic sample from Streptococcus pyogenes ABC020049299

SAMN02567527 • SRS551829 • All experiments • All runs

Organism: Streptococcus pyogenes ABC020049299

Library:

Name: Pond-319321

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 471656.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5CMXB

material_type: DNA:DNA Somatic

product_order: PDO-2718

product_part_number: P-WG-0004

project: G56764

research_project: RP-560

root_sample_id: SM-4PAHZ

sample_id: SM-5CMXB

work_request: 39852

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-29 22:04:07.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 3.4M spots, 682.6M bases, 344.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1159113	3,378,976	682.6M	344.2Mb	2014-02-04

ID:: 643223

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