Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450673: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213136' containing sample 'M3D14' from individual 'Balbc TB Infected Mouse 3 Day 14'
1 ILLUMINA (Illumina MiSeq) run: 59,384 spots, 20.8M bases, 11.4Mb downloads

UUID: 1d9c2f85-491a-4354-826a-f37cb98fe3f1

Design: Illumina sequencing of Mycobacterium tuberculosis M3D14 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02584422 • SRS544062 • All experiments • All runs

Organism: Mycobacterium tuberculosis M3D14

Library:

Name: Solexa-213136

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 469458.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C38E

material_type: DNA:DNA Somatic

product_order: PDO-2860

product_part_number: P-MCV-0002

project: G58778

research_project: RP-114

root_sample_id: SM-55CPJ

sample_id: SM-5C38E

work_request: 39975

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 59,384 spots, 20.8M bases, 11.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145491	59,384	20.8M	11.4Mb	2014-01-27

ID:: 629621

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity