Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450762: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213067' containing sample 'M15D10pre' from individual 'Black6 TB-Infected Mouse 5 Day -10pre'
1 ILLUMINA (Illumina MiSeq) run: 55,567 spots, 19.4M bases, 10.6Mb downloads

UUID: 6abf37e3-557c-4159-9606-3ee8dcb8cf6b

Design: Illumina sequencing of Mycobacterium tuberculosis M15D10pre via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02584521 • SRS544151 • All experiments • All runs

Organism: Mycobacterium tuberculosis M15D10pre

Library:

Name: Solexa-213067

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 469389.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C36F

material_type: DNA:DNA Somatic

product_order: PDO-2860

product_part_number: P-MCV-0002

project: G58709

research_project: RP-114

root_sample_id: SM-4RKGD

sample_id: SM-5C36F

work_request: 39975

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 55,567 spots, 19.4M bases, 10.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145579	55,567	19.4M	10.6Mb	2014-01-27

ID:: 629710

SRA

Sequence Read Archive

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