Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450630: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213107' containing sample 'M30D21' from individual 'RAG Uninfected Mouse 5 Day 21'
1 ILLUMINA (Illumina MiSeq) run: 58,374 spots, 20.4M bases, 11Mb downloads

UUID: 4e9d2006-855e-4b77-8ec3-43efa41d12ed

Design: Illumina sequencing of Mycobacterium tuberculosis M30D21 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02584561 • SRS544019 • All experiments • All runs

Organism: Mycobacterium tuberculosis M30D21

Library:

Name: Solexa-213107

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 469429.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C37K

material_type: DNA:DNA Somatic

product_order: PDO-2860

product_part_number: P-MCV-0002

project: G58749

research_project: RP-114

root_sample_id: SM-4RKHI

sample_id: SM-5C37K

work_request: 39975

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 58,374 spots, 20.4M bases, 11Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145448	58,374	20.4M	11Mb	2014-01-27

ID:: 629578

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Sequence Read Archive

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