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SRX1397823: Gephyrocrinus messingi : Echinoderm Tree of Life
1 ILLUMINA (Illumina HiSeq 2000) run: 24M spots, 4.8G bases, 2.9Gb downloads

Design: To better understand the phylogeny of extant echinoderms and the placement of Xyloplax, we employed Illumina HiSeq 2000 RNA-Seq to retrieve large numbers of orthologous loci from each transcriptome of 40 echinoderm species spanning deep divergences within each of the five extant classes with the aim of discovering orthologous peptide sequences that were well represented in asteroids, holothuroids, echinoids, ophiuroids and crinoids.
Submitted by: UNC Charlotte
Study: Gephyrocrinus messingi Transcriptome or Gene expression
show Abstracthide Abstract
To better understand the phylogeny of extant echinoderms and the placement of Xyloplax, we employed RNA-Seq to retrieve large numbers of orthologous loci from each transcriptome of 40 echinoderm species spanning deep divergences within each of the five extant classes with the aim of discovering orthologous peptide sequences that were well represented in asteroids, holothuroids, echinoids, ophiuroids and crinoids.
Sample: To better understand the phylogeny of extant echinoderms and the placement of Xyloplax, we employed RNA-Seq to retrieve large numbers of orthologous loci from each transcriptome of 40 echinoderm species spanning deep divergences within each of the five extant classes with the aim of discovering orthologous peptide sequences that were well represented in asteroids, holothuroids, echinoids, ophiuroids and crinoids.
SAMN04225961 • SRS1140234 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: PAIRED
Spot descriptor:
forward101  reverse

Runs: 1 run, 24M spots, 4.8G bases, 2.9Gb
Run# of Spots# of BasesSizePublished
SRR285980023,966,3784.8G2.9Gb2016-12-18

ID:
1984104

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