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SRX2626292: Nitrospiraceae bacterium UBA3562
1 ILLUMINA (Illumina HiSeq 1000) run: 20,222 spots, 619,612 bases, 310,261b downloads

Design: BWA (BWA-MEM) mapping of Nitrospiraceae bacterium UBA3562 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 49.33
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Nitrospiraceae bacterium UBA3562 genome recovered from SRX742692
SAMN06451000 • SRS2036249 • All experiments • All runs
Name: SRX742692.b4.bam
Instrument: Illumina HiSeq 1000
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 20,222 spots, 619,612 bases, 310,261b
Run# of Spots# of BasesSizePublished


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