Targeted sequencing of Hoffmannseggia doelli - SRA

SRX22462589: Targeted sequencing of Hoffmannseggia doelli
1 ILLUMINA (Illumina HiSeq 3000) run: 651,451 spots, 195.4M bases, 79.8Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://0-doi-org.brum.beds.ac.uk/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://0-doi-org.brum.beds.ac.uk/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Hoffmannseggia doelli

SAMN37581309 • SRS19476589 • All experiments • All runs

Organism: Hoffmannseggia doellii

Library:

Name: 711ae1a9-5e33-4aa8-91bf-8866d2bffc55

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 651,451 spots, 195.4M bases, 79.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764080	651,451	195.4M	79.8Mb	2023-11-09

ID:: 30448378

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