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SRX6856019: WGS of Antechinus arktos: ear tissue
1 BGISEQ (BGISEQ-500) run: 949.7M spots, 94.7G bases, 54.5Gb downloads

Design: DNA was extracted from ear tissue. Paired-end 350bp-insert DNA libraries were sequenced by BGI (Hong Kong), to generate ~30 genome coverage of 100bp paired-end reads. Raw data were filtered using Flexbar v3.4.0 (PMID 28541403). To remove microbial contaminants, we used bowtie2 v2.3.4.1 (PMID 22388286) to map reads to all bacterial and fungal sequences in NCBI Genomes.
Submitted by: Nanjing Normal University
Study: Insights into the trade-off between reproductive effort and survival from mammals with an annual life-history
show Abstracthide Abstract
In this project, we will investigate the semelparous mammals of South America during their short, highly-synchronised breeding seasons. Unveiling the life-history of these enigmatic animals using genomic data (genomes, transcriptomes, and epigenomes) will deliver insights into the evolution of semelparity, the universal ageing process, and marsupial biology. Data generated in this study will be shared through the community resource http://www.semelparous.life, creating opportunities for future studies and aiding conservation efforts.
Sample: Antechinus arktos WGS
SAMN12770001 • SRS5394164 • All experiments • All runs
Library:
Name: AA100
Instrument: BGISEQ-500
Strategy: WGS
Source: GENOMIC
Selection: RANDOM PCR
Layout: PAIRED
Runs: 1 run, 949.7M spots, 94.7G bases, 54.5Gb
Run# of Spots# of BasesSizePublished
SRR10127607949,714,89894.7G54.5Gb2021-08-17

ID:
9024026

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