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SRX4383673: Colobocentrotus atratus transcriptome
1 ILLUMINA (Illumina HiSeq 4000) run: 47.6M spots, 9.5G bases, 3.9Gb downloads

Design: Direct-zol RNA Miniprep Kit, KAPA Stranded RNA-Seq kit
Submitted by: Yale University
Study: A transcriptomic approach to resolve the sea urchin (Echinoidea, Echinodermata) phylogeny
show Abstracthide Abstract
Echinoids are model organisms in the fields of developmental biology and comparative genomics. They also possess a fossil record of exceptional quality, allowing for detailed studies on the origins of morphological and developmental innovations and their macroevolutionary consequences. However, the relationships among the main lineages of echinoids remain uncertain, as previous efforts have been unable to confidently resolve the oldest nodes in their phylogeny. We perform the first phylogenomic studies of sea urchins, relying on the de novo sequencing and assembly of transcriptomes for many of its distinct lineages. Our effort solve many phylogenetic uncertainties, opening up a new chapter in the study of the evolutionary history of this ancient clade of marine animals.
Sample:
SAMN09532177 • SRS3539885 • All experiments • All runs
Library:
Name: C
Instrument: Illumina HiSeq 4000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 47.6M spots, 9.5G bases, 3.9Gb
Run# of Spots# of BasesSizePublished
SRR751358847,600,7329.5G3.9Gb2018-11-01

ID:
5953660

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