Targeted sequencing of Indigofera alternans - SRA

SRX22453931: Targeted sequencing of Indigofera alternans
1 ILLUMINA (Illumina HiSeq 3000) run: 1.9M spots, 562.4M bases, 226.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 13

PRJNA1022141 • SRP471016 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://0-doi-org.brum.beds.ac.uk/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://0-doi-org.brum.beds.ac.uk/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Indigofera alternans

SAMN37590036 • SRS19467936 • All experiments • All runs

Organism: Indigofera alternans

Library:

Name: 26e884d2-7e8a-44de-b518-4a5a9d37e55d

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.9M spots, 562.4M bases, 226.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR26755472	1,874,801	562.4M	226.7Mb	2023-11-09

ID:: 30439601

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity