GBMF Marine Phage Sequencing Project - SRA

SRX042400: GBMF Marine Phage Sequencing Project
1 LS454 (454 GS FLX Titanium) run: 26,448 spots, 13.8M bases, 29.5Mb downloads

UUID: 3779b5f9-e7bc-4891-9f53-ccb4da5e8766

Design: International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology.

Submitted by: Broad Institute (BI)

Study: Synechococcus phage S-CAM1 isolate 0208SB26 genome sequencing project

PRJNA47615 • SRP005753 • All experiments • All runs

Sample: Generic sample from Synechococcus phage S-CAM1

SAMN00215887 • SRS172818 • All experiments • All runs

Organism: Synechococcus phage S-CAM1

Library:

Name: 454-5117

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
	AAGGTGC

12 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: DNA Viral 454 Alignment and Assembly

gssr_id: 42049.1

lsid: BROAD:SEQUENCING_SAMPLE:42049.1

material_type: Genomic DNA

project: G7155

work_request: 23118

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2010-08-02 19:25:09.0	454BaseCaller	2.3

Runs: 1 run, 26,448 spots, 13.8M bases, 29.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR100547	26,448	13.8M	29.5Mb	2011-06-30

ID:: 50672

SRA

Sequence Read Archive

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