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DRX057524: Illumina Genome Analyzer IIx sequencing of SAMD00053940
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 253,503 spots, 40.3M bases, 23Mb downloads

Submitted by: National Institute of Infectious Diseases - Japan (NIID)
Study: Identification of quasispecies in JC virus genome in patients with progressive multifocal leukoencephalopathy by deep sequencing
show Abstracthide Abstract
JC virus (JCV) is a DNA virus and a causative agent of progressive multifocal leukoencephalopathy (PML) in immunodeficient patients. In the present study, we identified quasispecies in JCV genome in the 6 clinical samples of PML by a next generation sequencer. Sequence data of JCV DNA analyzed by NGS in this study were deposited.
Sample: 11-53
SAMD00053940 • DRS034200 • All experiments • All runs
Organism: JC polyomavirus
Library:
Name: JCV in PML
Instrument: Illumina Genome Analyzer IIx
Strategy: WGS
Source: GENOMIC
Selection: other
Layout: SINGLE
Construction protocol: Genomic DNA Sample Prep Kit Illumina
Spot descriptor:
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Runs: 1 run, 253,503 spots, 40.3M bases, 23Mb
Run# of Spots# of BasesSizePublished
DRR063283253,50340.3M23Mb2016-10-05

ID:
3246405

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