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DRX069913: Illumina HiSeq 2500 paired end sequencing of SAMD00066538
1 ILLUMINA (Illumina HiSeq 2500) run: 24.5M spots, 3.7G bases, 1.5Gb downloads

Submitted by: TITECH
Study: Medaka Osteoclast2
show Abstracthide Abstract
During space flight, bone mineral density is decreased by the influence of osteoclast activation, which molecular mechanism is expectantly investigated. In the study of medaka bone development, we investigated the system of vertebra formation, and firstly identified the presence of osteoclasts in medaka. Moreover, osteoclast rsorbing activity was affected by hypergravity, indicating the possibility that we can investigate the effect of microgravity on osteoclasts in space. To find this effect, we examine the alteration of osteoclast activity under microgravity with the histological analysis or the expression analysis by RNA in-situ hybridization. Furthermore, since we have succeeded the establishment of the medaka osteoclast-specific transgenic lines, we perform the in-vivo imaging analyses for gene expression and cell mobility. Finally, to examine the gravity sensing system, we employ tooth and bone as the high density organs, which are highly sensitive to gravity, and perform the histological analysis and the gene expression analysis of such gravity-sensitive tissues at surrounding pharyngeal teeth and supporting bone.
Sample: Wholebody Flight Day2 Japan
SAMD00066538 • DRS040706 • All experiments • All runs
Organism: Oryzias latipes
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol:
Spot descriptor:
forward39  reverse

Runs: 1 run, 24.5M spots, 3.7G bases, 1.5Gb
Run# of Spots# of BasesSizePublished
DRR07606924,507,8443.7G1.5Gb2017-02-28

ID:
3761290

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