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ERX192818: Synthetic Genomics of tropical clawed frog
1 ILLUMINA (Illumina HiSeq 2000) run: 15.8M spots, 2.4G bases, 1.7Gb downloads

Design: Illumina sequencing of library 4473554, constructed from sample accession ERS089306 for study accession ERP002095. This is part of an Illumina multiplexed sequencing run (7822_8). This submission includes reads tagged with the sequence GCCAATGT.
Submitted by: The Wellcome Trust Sanger Institute (SC)
Study: XT_mutant_RNAseq
show Abstracthide Abstract
We have identified by tilling a Xenopus tropicalis rax mutant in which the gene has a premature stop codon before the homeobox domain. The rax gene is essential for eye development and has been identified as a causative gene for human ocular malformations such as anophthalmia and microphthalmia. The phenotype of the X.tropicalis mutant replicates the human condition with complete loss or small eyes. By analysis of the full RNA complement of rax mutants compared to wild type siblings we hope to gain a better understanding of the role of rax during eye development and the genes that it regulates. This is part of an ongoing collaboration with Dr Robert Grainger, University of Virginia. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see www.sanger.ac.uk/datasharing/
Sample:
SAMEA1696416 • ERS089306 • All experiments • All runs
Library:
Name: 4473554
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Illumina cDNA protocol
Runs: 1 run, 15.8M spots, 2.4G bases, 1.7Gb
Run# of Spots# of BasesSizePublished
ERR21815315,760,2552.4G1.7Gb2013-07-17

ID:
297476

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