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ERX609206: Illumina HiSeq 2500 paired end sequencing; Sequencing of LPS-stimulated immune cells from chicken
1 ILLUMINA (Illumina HiSeq 2500) run: 18.7M spots, 3.7G bases, 1.3Gb downloads

Design: Sequencing of LPS-stimulated immune cells from chicken
Submitted by: The Roslin Institute
Study: Sequencing of LPS-stimulated immune cells from chicken
show Abstracthide Abstract
RNAs were analysed from bone marrow derived dendritic cells from 6 week old birds (control and LPS stimulated), bone marrow derived macrophages from 6 week old birds (control and LPS stimulated) and heterophils isolated from blood of day-old chicks (control and LPS stimulated).
Sample: Kaiser_heterophil_control
SAMEA2812695 • ERS565091 • All experiments • All runs
Organism: Gallus gallus
Library:
Name: Kaiser_heterophil_control
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Macrophages and dendritic cells were cultured from bone marrow by standard methods (Garceau et al. 2010 and Wu et al. 2010, respectively), and heterophils isolated from blood by standard methods (Kogut et al. 1995). Cells were cultured with or without LPS for 24 h before RNA was isolated Standard Trizol extraction method Samples were prepared for mRNA sequencing using 2ug of total RNA starting material following the Illumina TruSeq RNA Sample Preparation v2 kit protocol.
Spot descriptor:
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Experiment attributes:
Experimental Factor: stimulus: none
Experimental Factor: cell type: heterophil
LIBRARY_STRAND: not applicable
Runs: 1 run, 18.7M spots, 3.7G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
ERR65285018,658,6343.7G1.3Gb2015-01-28

ID:
1209699

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