GSM2059059: BK-mixtures; Sus scrofa; RNA-Seq - SRA

SRX1569844: GSM2059059: BK-mixtures; Sus scrofa; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 29.3M spots, 5.9G bases, 3.6Gb downloads

Submitted by: NCBI (GEO)

Study: Transcriptome data used for gene annotation

PRJNA311523 • SRP069860 • All experiments • All runs

show Abstracthide Abstract

To optimize the genome annotation, nine tissue and one pool RNA libraries (i.e. heart, liver, spleen, lung, kidney, muscle, fat, ovary, pool.) were constructed using the Illumina mRNA-spleeneq Prep Kit Overall design: We sequenced nine tissues and one pool using illumina Hiseq 2500 platform

Sample: BK-mixtures

SAMN04484964 • SRS1283265 • All experiments • All runs

Organism: Sus scrofa

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: PAIRED

Construction protocol: The total RNA was extracted using the TrIzol reagent (Life Technologies, Beijing, China) according to the manufacturer’s protocols. Illumina TruSeq RNA Sample Prep Kit was used with 1 ug of total RNA for the construction of sequencing libraries. RNA libraries were prepared for sequencing using standard Illumina protocols

Experiment attributes:

GEO Accession: GSM2059059

Links:

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 29.3M spots, 5.9G bases, 3.6Gb

Run	# of Spots	# of Bases	Size	Published
SRR3159997	29,255,721	5.9G	3.6Gb	2016-07-05

ID:: 2222650

SRA

Sequence Read Archive

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