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SRX179279: transcriptome analysis of AcMNPV infected Tnms42 cells at 6 hour post infection
5 ILLUMINA (Illumina HiSeq 2000) runs: 93.9M spots, 9.3G bases, 5.9Gb downloads

Submitted by: Boyce Thompson Institute
Study: Transcriptome analysis of autographa californica nucleopolyhedrovirus
show Abstracthide Abstract
We report the first comprehensive set of AcMNPV transcriptome maps during the infection of Trichoplusia ni cells generated by a combination of strand-specific RNA-seq (ssRNA-seq) approach and deep sequencing of 5’ capped transcriptional start sites, and 3’ polyadenylated sites.
Sample: AcMNPV infected Tnms42 cells at 6 hour post infection
SAMN01120812 • SRS358660 • All experiments • All runs
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
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Runs: 5 runs, 93.9M spots, 9.3G bases, 5.9Gb
Run# of Spots# of BasesSizePublished
SRR54491113,500,3201.4G889.9Mb2015-07-22
SRR54491219,202,6901.9G1.2Gb2015-07-22
SRR54491343,373,8304.4G2.8Gb2015-07-22
SRR54491414,698,2261.5G969Mb2015-07-22
SRR5449163,084,466157.3M107.2Mb2015-07-22

ID:
230277

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