Mycobacterium sp. VKM Ac-1817D grown on a medum with phytosterol and ... - SRA

SRX2310501: Mycobacterium sp. VKM Ac-1817D grown on a medum with phytosterol and with MCD, biological replicate 2
1 ILLUMINA (Illumina HiSeq 2000) run: 11.1M spots, 566.1M bases, 392.9Mb downloads

Design: Total RNA was isolated using Qiagen RNeasy mini kit. The resulting mixture was treated with DNase I. Ribosomal RNA was depleted using with Ribo-Zero rRNA Removal Kit (Bacteria) (Epicentre, USA). Sample preparation of mRNA was made with TruSeq RNA Sample prep kit v.2.

Submitted by: Laboratory of Evolutionary Genomics, Moscow State University

Study: Study of bacteria which catabolize steroids

PRJNA350502 • SRP092314 • All experiments • All runs

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The aim is to study genetic basis of steroid catabolism by bacteria

Sample: Mycobacterium sp. VKM Ac-1817D grown on a medium with phytosterol and with MCD

SAMN05941441 • SRS1768452 • All experiments • All runs

Organism: Mycobacterium

Library:

Name: Phytosterol_with_MCD_Replicate_2

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq