RNA-seq of Nematostella vectensis: pooled whole organisms - SRA

SRX2499938: RNA-seq of Nematostella vectensis: pooled whole organisms
1 ILLUMINA (Illumina HiSeq 2000) run: 20.5M spots, 2G bases, 634.6Mb downloads

Design: polyA libraries made by a core facility (University of Rochester) using TruSeq reagents; quality trimming done by facility

Submitted by: Woods Hole Oceanographic Institution

Study: Daily patterns in gene expression in field-reared Nematostella

PRJNA362308 • SRP096950 • All experiments • All runs

show Abstracthide Abstract

Previous studies have described circadian and diel gene expression patterns in this species under lab culture conditions (pyrex dishes, 12h light-dark cycle). This study explores daily gene expression in animals that were explanted to field conditions (salt marsh sediments) and then sampled over a 24-h period in the lab.

Sample:

SAMN06237874 • SRS1926565 • All experiments • All runs

Organism: Nematostella vectensis

Library:

Name: Nv_field_T10repA

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: unspecified

Layout: SINGLE

Runs: 1 run, 20.5M spots, 2G bases, 634.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR5183898	20,548,824	2G	634.6Mb	2017-01-23

ID:: 3623464

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity