RNA-Seq of corn snake posterior trunk 4.5 dpo, replicate 1 - SRA

SRX3822944: RNA-Seq of corn snake posterior trunk 4.5 dpo, replicate 1
1 ILLUMINA (Illumina HiSeq 2500) run: 40.7M spots, 4.1G bases, 2.4Gb downloads

Design: Libraries were constructed with the Illumina TruSeq stranded mRNA protocol, with polyA selection.

Submitted by: Universite Claude Bernard - Lyon 1, CNRS

Study: Comparative transcriptomics of mouse and corn snake tail development

PRJNA439191 • SRP136054 • All experiments • All runs

show Abstracthide Abstract

To compare gene expression patterns between mouse and corn snake tail development, we generated RNA sequencing data for 5 time points for the mouse (E9.5 to E13.5) and for 4 time points for the corn snake (day 2.5 to 5.5 post oviposition). Using this dataset, we identified numerous instances of species-specific temporal variations in gene expression, including developmental genes involved in anterior/posterior patterning.

Sample: corn snake 4.5 dpo replicate 1

SAMN08742072 • SRS3072555 • All experiments • All runs

Organism: Pantherophis guttatus

Library:

Name: EG4_1

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Runs: 1 run, 40.7M spots, 4.1G bases, 2.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR6868485	40,688,659	4.1G	2.4Gb	2019-12-01

ID:: 5260278

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