Colon sample from a female chimpanzee.: Sample Chimpanzee_Colon_367 - SRA

SRX843151: Colon sample from a female chimpanzee.: Sample Chimpanzee_Colon_367
1 ILLUMINA (Illumina HiSeq 2000) run: 102.1M spots, 20.6G bases, 13Gb downloads

Design: "The total RNA-Seq libraries were constructed using the Illumina TruSeq Stranded Total RNA Sample Prep Kit with Ribo-Zero Gold (catalog #RS-122-2201), which targets RNA for cDNA synthesis. This kit uses Ribo-Zero to remove rRNA prior to library preparation. Whole blood samples were additionally globin-depleted (prepared using the TruSeq Stranded Total RNA with Ribo-Zero Globin kit from Illumina. The libraries were quality controlled for appropriate mass and insert size (also for evidence of DNA contamination) and quantitated using the BioAnalyzer 2100 system and qPCR (Kapa Biosystems, Woburn, MA)."

Submitted by: (NREMC)

Study: Tissue-specific RNA-sequencing for ten non-human primate species.

PRJNA271912 • SRP051959 • All experiments • All runs

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Total RNA sequencing of fifteen different tissues for ten non-human primates (baboon, chimpanzee, cynomolgus macaque Chinese, cynomolgus macaque Mauritian, Japanese macaque, owl monkey, pig-tailed macaque, rhesus macaque Chinese, rhesus macaque Indian, ring-tailed lemur, sooty mangabey, squirrel monkey).

Sample: Colon sample from a female chimpanzee.

SAMN03282311 • SRS819327 • All experiments • All runs

Organism: Pan troglodytes

Library:

Name: chp_367_1

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: other

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Runs: 1 run, 102.1M spots, 20.6G bases, 13Gb

Run	# of Spots	# of Bases	Size	Published
SRR1758920	102,117,236	20.6G	13Gb	2015-01-28

ID:: 1192982

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