U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX5063198: Whole genome shotgun sequencing of FSIS11808955 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 688,717 spots, 205.6M bases, 123.8Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: United States Department of Agriculture, Food Safety and Inspection Service (USDA-FSIS)
Study: FSIS NARMS Enterococcus
PRJNA292669 • SRP095353 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of foodborne pathogens as part of the US Department of Agriculture surveillance project for NARMS.
Sample:
SAMN10482718 • SRS4079072 • All experiments • All runs
Organism: Enterococcus faecalis
Library:
Name: FSIS11808955 Nextera XT shotgun library
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for FSIS11808955.
Spot descriptor:
1  forward151  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.18.54
Runs: 1 run, 688,717 spots, 205.6M bases, 123.8Mb
Run# of Spots# of BasesSizePublished
SRR8245134688,717205.6M123.8Mb2018-11-27

ID:
6832839

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...